Calcium in PDB 3o0x: Structural Basis of Carbohydrate Recognition By Calreticulin

The structure of Structural Basis of Carbohydrate Recognition By Calreticulin, PDB code: 3o0x was solved by G.Kozlov, K.Gehring, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	42.08 / 2.01
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	74.619, 43.225, 84.632, 90.00, 96.05, 90.00
R / Rfree (%)	19.1 / 24

The binding sites of Calcium atom in the Structural Basis of Carbohydrate Recognition By Calreticulin (pdb code 3o0x). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Structural Basis of Carbohydrate Recognition By Calreticulin, PDB code: 3o0x:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Structural Basis of Carbohydrate Recognition By Calreticulin


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structural Basis of Carbohydrate Recognition By Calreticulin within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca377 b:22.2 occ:1.00 O A:HOH436 2.2 20.4 1.0 O A:LYS64 2.3 24.4 1.0 O A:GLN26 2.4 23.6 1.0 O A:HOH466 2.4 17.4 1.0 O A:LYS62 2.5 26.8 1.0 OD2 A:ASP328 2.5 17.1 1.0 OD1 A:ASP328 2.5 17.6 1.0 CG A:ASP328 2.8 18.6 1.0 C A:LYS64 3.5 24.8 1.0 C A:GLN26 3.5 24.3 1.0 C A:LYS62 3.5 28.4 1.0 N A:LYS64 3.7 26.9 1.0 C A:ASP63 4.0 26.4 1.0 CA A:LYS64 4.1 26.6 1.0 O A:HOH242 4.1 25.6 1.0 CA A:GLN26 4.1 23.8 1.0 CA A:ASP63 4.2 27.2 1.0 N A:ASP63 4.2 28.2 1.0 CB A:ASP328 4.3 18.0 1.0 ND2 A:ASN329 4.4 21.3 1.0 O A:PHE27 4.4 27.8 1.0 CB A:GLN26 4.5 25.4 1.0 CB A:PHE27 4.5 25.1 1.0 CA A:LYS62 4.5 30.3 1.0 N A:PHE27 4.5 24.4 1.0 O A:GLU61 4.5 30.5 1.0 CB A:LYS64 4.5 27.8 1.0 N A:GLY65 4.5 24.0 1.0 C A:PHE27 4.6 28.3 1.0 O A:ASP63 4.7 25.7 1.0 CD2 A:PHE27 4.8 23.2 1.0 CA A:PHE27 4.8 26.0 1.0 OD1 A:ASN329 4.8 24.7 1.0 CD2 A:LEU28 4.8 36.6 1.0 CG A:ASN329 4.9 21.3 1.0 CA A:GLY65 4.9 22.6 1.0 O A:HOH492 5.0 34.3 1.0 O A:HOH396 5.0 23.4 1.0

Calcium binding site 2 out of 2 in the Structural Basis of Carbohydrate Recognition By Calreticulin


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Structural Basis of Carbohydrate Recognition By Calreticulin within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca2 b:19.9 occ:1.00 O B:GLN26 2.3 22.4 1.0 O B:LYS62 2.3 21.4 1.0 O B:LYS64 2.4 20.3 1.0 O B:HOH404 2.4 17.5 1.0 O B:HOH390 2.5 16.9 1.0 OD2 B:ASP328 2.5 19.9 1.0 OD1 B:ASP328 2.6 18.1 1.0 CG B:ASP328 2.9 19.1 1.0 C B:GLN26 3.4 23.1 1.0 C B:LYS62 3.5 21.8 1.0 C B:LYS64 3.5 19.9 1.0 N B:LYS64 3.8 20.6 1.0 CA B:GLN26 4.1 23.3 1.0 C B:ASP63 4.1 21.0 1.0 CA B:LYS64 4.1 20.5 1.0 N B:ASP63 4.3 21.4 1.0 CA B:ASP63 4.3 21.4 1.0 O B:HOH380 4.3 24.1 1.0 CB B:GLN26 4.3 23.6 1.0 ND2 B:ASN329 4.4 19.9 1.0 CA B:LYS62 4.4 22.8 1.0 CB B:ASP328 4.4 17.3 1.0 O B:PHE27 4.4 25.1 1.0 N B:PHE27 4.5 23.7 1.0 CB B:PHE27 4.6 23.7 1.0 O B:GLU61 4.6 23.4 1.0 N B:GLY65 4.6 19.3 1.0 C B:PHE27 4.6 25.3 1.0 CD2 B:PHE27 4.7 23.6 1.0 CB B:LYS64 4.7 21.1 1.0 CD2 B:LEU28 4.7 27.2 1.0 CA B:PHE27 4.8 24.7 1.0 O B:ASP63 4.9 20.2 1.0 CG B:ASN329 4.9 20.7 1.0 CA B:GLY65 5.0 18.4 1.0 OD1 B:ASN329 5.0 22.5 1.0

G.Kozlov, C.L.Pocanschi, A.Rosenauer, S.Bastos-Aristizabal, A.Gorelik, D.B.Williams, K.Gehring. Structural Basis of Carbohydrate Recognition By Calreticulin. J.Biol.Chem. V. 285 38612 2010.
ISSN: ISSN 0021-9258
PubMed: 20880849
DOI: 10.1074/JBC.M110.168294