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Calcium in PDB 3o5s: Crystal Structure of the Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168)

Enzymatic activity of Crystal Structure of the Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168)

All present enzymatic activity of Crystal Structure of the Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168):
3.2.1.73;

Protein crystallography data

The structure of Crystal Structure of the Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168), PDB code: 3o5s was solved by C.R.Santos, C.C.C.Tonoli, A.R.Souza, G.P.Furtado, L.F.Ribeiro, R.J.Ward, M.T.Murakami, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.80 / 2.20
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 103.758, 103.758, 102.097, 90.00, 90.00, 90.00
R / Rfree (%) 24.9 / 29.2

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168) (pdb code 3o5s). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168), PDB code: 3o5s:

Calcium binding site 1 out of 1 in 3o5s

Go back to Calcium Binding Sites List in 3o5s
Calcium binding site 1 out of 1 in the Crystal Structure of the Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca243

b:55.1
occ:1.00
 O A:HOH419 2.3 30.3 1.0
O A:GLY73 2.4 35.9 1.0
OD1 A:ASP235 2.6 35.0 1.0
O A:PRO37 2.6 32.5 1.0
O A:ASP235 2.6 30.5 1.0
O A:HOH414 2.6 27.1 1.0
CG A:ASP235 3.5 33.3 1.0
C A:ASP235 3.5 30.3 1.0
C A:GLY73 3.5 35.9 1.0
C A:PRO37 3.6 32.7 1.0
CA A:ASP235 4.0 29.4 1.0
CA A:GLY73 4.1 37.5 1.0
CA A:PRO37 4.2 34.1 1.0
OD2 A:ASP235 4.3 34.4 1.0
CB A:ASP235 4.3 31.3 1.0
CB A:PRO37 4.5 36.7 1.0
N A:TRP236 4.6 29.7 1.0
O A:LEU72 4.6 41.9 1.0
OD1 A:ASN39 4.7 35.3 1.0
N A:GLU74 4.7 32.9 1.0
N A:PHE38 4.8 32.1 1.0
CB A:TRP236 4.8 30.6 1.0
CB A:PHE38 4.9 30.0 1.0
C A:PHE38 4.9 33.2 1.0
CD1 A:TRP236 5.0 32.2 1.0
CA A:GLU74 5.0 31.2 1.0

Reference:

G.P.Furtado, L.F.Ribeiro, C.R.Santos, C.C.Tonoli, A.R.De Souza, R.R.Oliveira, M.Tyago. Biochemical and Structural Characterization of A Beta-1,3 1,4-Glucanase From Bacillus Subtilis 168 Process Biochem V. 46 1202 2011.
ISSN: ISSN 1359-5113
DOI: 10.1016/J.PROCBIO.2011.01.037
Page generated: Sat Jul 13 15:13:23 2024

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