Atomistry » Calcium » PDB 3ojt-3p1h » 3oss
Atomistry »
  Calcium »
    PDB 3ojt-3p1h »
      3oss »

Calcium in PDB 3oss: The Crystal Structure of Enterotoxigenic Escherichia Coli Gspc-Gspd Complex From the Type II Secretion System

Protein crystallography data

The structure of The Crystal Structure of Enterotoxigenic Escherichia Coli Gspc-Gspd Complex From the Type II Secretion System, PDB code: 3oss was solved by K.V.Korotkov, J.Pruneda, W.G.J.Hol, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.88 / 2.63
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 45.500, 76.810, 85.770, 90.00, 90.00, 90.00
R / Rfree (%) 21.3 / 26.5

Other elements in 3oss:

The structure of The Crystal Structure of Enterotoxigenic Escherichia Coli Gspc-Gspd Complex From the Type II Secretion System also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the The Crystal Structure of Enterotoxigenic Escherichia Coli Gspc-Gspd Complex From the Type II Secretion System (pdb code 3oss). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the The Crystal Structure of Enterotoxigenic Escherichia Coli Gspc-Gspd Complex From the Type II Secretion System, PDB code: 3oss:

Calcium binding site 1 out of 1 in 3oss

Go back to Calcium Binding Sites List in 3oss
Calcium binding site 1 out of 1 in the The Crystal Structure of Enterotoxigenic Escherichia Coli Gspc-Gspd Complex From the Type II Secretion System


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Crystal Structure of Enterotoxigenic Escherichia Coli Gspc-Gspd Complex From the Type II Secretion System within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ca800

b:39.8
occ:1.00
OD1 D:ASN703 2.3 43.9 1.0
O D:TYR707 2.3 36.3 1.0
OD1 D:ASP705 2.3 41.5 1.0
OD1 D:ASP701 2.4 34.9 1.0
CG D:ASN703 3.2 47.3 1.0
CG D:ASP705 3.2 45.2 1.0
O D:HOH717 3.3 28.1 1.0
OE1 D:GLU709 3.3 51.1 1.0
ND2 D:ASN703 3.3 51.4 1.0
OD2 D:ASP705 3.4 49.1 1.0
OE2 D:GLU709 3.4 55.1 1.0
C D:TYR707 3.5 35.4 1.0
CG D:ASP701 3.6 33.9 1.0
CD D:GLU709 3.7 52.4 1.0
OD2 D:ASP701 4.2 36.0 1.0
CA D:TYR707 4.4 35.6 1.0
N D:ILE708 4.5 35.0 1.0
N D:TYR707 4.5 35.8 1.0
CB D:ASP705 4.5 48.9 1.0
N D:ASN703 4.5 42.7 1.0
CA D:ILE708 4.6 35.5 1.0
CB D:ASN703 4.6 51.2 1.0
CB D:TYR707 4.7 38.7 1.0
CB D:ASP701 4.8 32.7 1.0
CA D:ASP701 4.8 31.7 1.0
N D:THR702 4.9 34.3 1.0
N D:ASP705 4.9 46.0 1.0
CA D:ASN703 5.0 48.8 1.0

Reference:

K.V.Korotkov, T.L.Johnson, M.G.Jobling, J.Pruneda, E.Pardon, A.Heroux, S.Turley, J.Steyaert, R.K.Holmes, M.Sandkvist, W.G.Hol. Structural and Functional Studies on the Interaction of Gspc and Gspd in the Type II Secretion System. Plos Pathog. V. 7 02228 2011.
ISSN: ISSN 1553-7366
PubMed: 21931548
DOI: 10.1371/JOURNAL.PPAT.1002228
Page generated: Sat Dec 12 04:23:47 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy