Calcium in PDB 3pe0: Structure of the Central Region of the Plakin Domain of Plectin

The structure of Structure of the Central Region of the Plakin Domain of Plectin, PDB code: 3pe0 was solved by E.Ortega, J.M.De Pereda, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.98 / 2.95
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	72.650, 108.512, 112.139, 90.00, 90.00, 90.00
R / Rfree (%)	24.1 / 26.5

The binding sites of Calcium atom in the Structure of the Central Region of the Plakin Domain of Plectin (pdb code 3pe0). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Structure of the Central Region of the Plakin Domain of Plectin, PDB code: 3pe0:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Structure of the Central Region of the Plakin Domain of Plectin


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of the Central Region of the Plakin Domain of Plectin within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1001 b:82.2 occ:1.00 O A:ASP789 2.4 91.3 1.0 O A:GLN792 2.6 0.7 1.0 C A:ASP789 3.6 90.4 1.0 C A:GLN792 3.6 0.0 1.0 CB A:GLN792 3.8 0.5 1.0 CA A:GLN792 4.0 0.9 1.0 N A:GLN792 4.2 0.8 1.0 CA A:ASP789 4.4 89.0 1.0 N A:LEU790 4.5 79.1 1.0 CA A:LEU790 4.5 80.6 1.0 N A:ALA794 4.6 98.0 1.0 O A:LEU790 4.6 83.4 1.0 C A:LEU790 4.7 81.9 1.0 N A:ASP793 4.7 98.0 1.0 CB A:ASP789 4.8 0.1 1.0 CB A:ALA794 4.9 74.6 1.0

Calcium binding site 2 out of 2 in the Structure of the Central Region of the Plakin Domain of Plectin


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Structure of the Central Region of the Plakin Domain of Plectin within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca1001 b:86.3 occ:1.00 O B:ASP789 2.4 74.1 1.0 O B:GLN792 2.6 88.7 1.0 C B:ASP789 3.6 73.3 1.0 C B:GLN792 3.6 88.9 1.0 CB B:GLN792 3.8 0.4 1.0 CA B:GLN792 4.1 88.1 1.0 N B:GLN792 4.3 86.8 1.0 CA B:ASP789 4.4 73.5 1.0 N B:LEU790 4.5 68.1 1.0 CA B:LEU790 4.6 67.9 1.0 N B:ALA794 4.6 94.5 1.0 O B:LEU790 4.6 68.8 1.0 C B:LEU790 4.7 68.3 1.0 N B:ASP793 4.8 0.5 1.0 CB B:ASP789 4.8 91.8 1.0 CB B:ALA794 4.8 67.8 1.0

E.Ortega, R.M.Buey, A.Sonnenberg, J.M.De Pereda. The Structure of the Plakin Domain of Plectin Reveals A Non-Canonical SH3 Domain Interacting with Its Fourth Spectrin Repeat. J.Biol.Chem. V. 286 12429 2011.
ISSN: ISSN 0021-9258
PubMed: 21288893
DOI: 10.1074/JBC.M110.197467