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Calcium in PDB 3qsj: Crystal Structure of Nudix Hydrolase From Alicyclobacillus Acidocaldarius

Protein crystallography data

The structure of Crystal Structure of Nudix Hydrolase From Alicyclobacillus Acidocaldarius, PDB code: 3qsj was solved by K.Michalska, R.Wu, J.Bearden, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.42 / 1.70
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 74.844, 82.152, 36.614, 90.00, 90.00, 90.00
R / Rfree (%) 17.5 / 20.5

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Nudix Hydrolase From Alicyclobacillus Acidocaldarius (pdb code 3qsj). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Nudix Hydrolase From Alicyclobacillus Acidocaldarius, PDB code: 3qsj:

Calcium binding site 1 out of 1 in 3qsj

Go back to Calcium Binding Sites List in 3qsj
Calcium binding site 1 out of 1 in the Crystal Structure of Nudix Hydrolase From Alicyclobacillus Acidocaldarius


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Nudix Hydrolase From Alicyclobacillus Acidocaldarius within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca230

b:19.1
occ:1.00
O3 A:GOL232 2.2 36.6 1.0
OE2 A:GLU83 2.2 22.3 1.0
O A:GLY43 2.3 20.3 1.0
O A:HOH234 2.3 28.0 1.0
OE1 A:GLU79 2.4 22.9 1.0
O2 A:GOL232 2.4 27.7 1.0
O A:HOH235 2.5 25.9 1.0
C3 A:GOL232 3.1 37.7 1.0
C2 A:GOL232 3.2 36.8 1.0
CD A:GLU83 3.2 25.6 1.0
C A:GLY43 3.5 20.1 1.0
CD A:GLU79 3.6 26.0 1.0
CG A:GLU83 3.8 17.5 1.0
OE1 A:GLU83 4.2 25.4 1.0
CA A:GLY44 4.2 16.2 1.0
N A:GLY43 4.2 15.0 1.0
CB A:GLU79 4.3 17.6 1.0
N A:GLY44 4.3 15.6 1.0
CG A:GLU79 4.4 18.0 1.0
OE2 A:GLU79 4.4 24.8 1.0
O A:HOH395 4.4 30.0 1.0
CA A:GLY43 4.5 15.6 1.0
O A:HOH250 4.5 26.8 1.0
C1 A:GOL232 4.5 43.4 1.0
O A:HOH276 4.6 35.1 1.0
O A:HOH378 4.6 31.0 1.0
O1 A:GOL232 4.7 45.8 1.0
O A:GLU79 4.8 17.0 1.0
CA A:GLU79 4.9 16.1 1.0
OE1 A:GLU82 4.9 28.3 1.0

Reference:

K.Michalska, R.Wu, J.Bearden, A.Joachimiak. Crystal Structure of Nudix Hydrolase From Alicyclobacillus Acidocaldarius To Be Published.
Page generated: Sat Dec 12 04:27:17 2020

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