Calcium in PDB 3snm: Crystal Structure of A Lectin From Canavalia Maritima Seeds Complexed with Indole-3-Acetic Acid

The structure of Crystal Structure of A Lectin From Canavalia Maritima Seeds Complexed with Indole-3-Acetic Acid, PDB code: 3snm was solved by P.Delatorre, J.C.Silva-Filho, R.B.Nobrega, B.C.Rocha, B.S.Cavada, C.A.A.Gadelha, T.Santi-Gadelha, K.L.Alencar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.36 / 2.15
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	67.190, 70.740, 97.750, 90.00, 90.00, 90.00
R / Rfree (%)	20.6 / 22.5

The structure of Crystal Structure of A Lectin From Canavalia Maritima Seeds Complexed with Indole-3-Acetic Acid also contains other interesting chemical elements:

Manganese

(Mn)

1 atom

The binding sites of Calcium atom in the Crystal Structure of A Lectin From Canavalia Maritima Seeds Complexed with Indole-3-Acetic Acid (pdb code 3snm). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of A Lectin From Canavalia Maritima Seeds Complexed with Indole-3-Acetic Acid, PDB code: 3snm:

Calcium binding site 1 out of 1 in the Crystal Structure of A Lectin From Canavalia Maritima Seeds Complexed with Indole-3-Acetic Acid


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A Lectin From Canavalia Maritima Seeds Complexed with Indole-3-Acetic Acid within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca238 b:33.1 occ:1.00 OD2 A:ASP19 2.2 29.6 1.0 O A:TYR12 2.3 27.7 1.0 OD1 A:ASN14 2.4 24.0 1.0 OD2 A:ASP10 2.6 25.1 1.0 OD1 A:ASP10 2.6 27.9 1.0 CG A:ASP10 3.0 25.2 1.0 CG A:ASP19 3.3 29.1 1.0 CG A:ASN14 3.5 30.3 1.0 C A:TYR12 3.5 26.8 1.0 OD1 A:ASP19 3.8 19.3 1.0 N A:ASN14 3.9 31.5 1.0 MN A:MN239 4.0 31.7 1.0 CB A:ASN14 4.1 30.9 1.0 CE1 A:HIS24 4.4 21.3 1.0 CA A:TYR12 4.4 27.1 1.0 CB A:ASP10 4.5 18.9 1.0 N A:PRO13 4.5 27.5 1.0 CB A:TYR12 4.5 27.1 1.0 N A:TYR12 4.5 25.4 1.0 O A:ARG228 4.5 32.4 1.0 CB A:ASP19 4.6 31.9 1.0 ND2 A:ASN14 4.6 30.6 1.0 CA A:ASN14 4.6 31.6 1.0 C A:PRO13 4.6 29.6 1.0 CB A:ARG228 4.7 33.8 1.0 CA A:PRO13 4.7 28.1 1.0 NE2 A:HIS24 4.7 25.1 1.0 CA A:ARG228 4.7 33.2 1.0 O A:ASP208 4.8 32.0 1.0

P.Delatorre, J.C.Silva-Filho, B.A.Rocha, T.Santi-Gadelha, R.B.Da Nobrega, C.A.Gadelha, K.S.Do Nascimento, C.S.Nagano, A.H.Sampaio, B.S.Cavada. Interactions Between Indole-3-Acetic Acid (Iaa) with A Lectin From Canavalia Maritima Seeds Reveal A New Function For Lectins in Plant Physiology. Biochimie V. 95 1697 2013.
ISSN: ISSN 0300-9084
PubMed: 23727478
DOI: 10.1016/J.BIOCHI.2013.05.008