Calcium in PDB 3son: Crystal Structure of A Putativel Nudix Hydrolase (LMOF2365_2679) From Listeria Monocytogenes Str. 4B F2365 at 1.70 A Resolution

The structure of Crystal Structure of A Putativel Nudix Hydrolase (LMOF2365_2679) From Listeria Monocytogenes Str. 4B F2365 at 1.70 A Resolution, PDB code: 3son was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.67 / 1.71
Space group	P 43
Cell size a, b, c (Å), α, β, γ (°)	57.880, 57.880, 94.490, 90.00, 90.00, 90.00
R / Rfree (%)	16.3 / 19.6

The binding sites of Calcium atom in the Crystal Structure of A Putativel Nudix Hydrolase (LMOF2365_2679) From Listeria Monocytogenes Str. 4B F2365 at 1.70 A Resolution (pdb code 3son). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of A Putativel Nudix Hydrolase (LMOF2365_2679) From Listeria Monocytogenes Str. 4B F2365 at 1.70 A Resolution, PDB code: 3son:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Crystal Structure of A Putativel Nudix Hydrolase (LMOF2365_2679) From Listeria Monocytogenes Str. 4B F2365 at 1.70 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A Putativel Nudix Hydrolase (LMOF2365_2679) From Listeria Monocytogenes Str. 4B F2365 at 1.70 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca201 b:46.6 occ:1.00 O A:HOH356 2.1 33.6 1.0 O A:ALA36 2.3 24.2 1.0 OE1 A:GLU52 2.3 34.2 1.0 OE2 A:GLU56 2.7 31.5 1.0 O A:HOH415 2.7 40.4 1.0 O A:HOH464 3.3 54.3 1.0 CD A:GLU52 3.4 32.6 1.0 C A:ALA36 3.5 21.1 1.0 CD A:GLU56 3.7 27.6 1.0 O A:HOH391 3.7 37.4 1.0 CA A:GLY37 3.9 22.0 1.0 OE2 A:GLU52 4.0 44.7 1.0 CG A:GLU56 4.1 26.9 1.0 N A:GLY37 4.2 21.3 1.0 N A:ALA36 4.6 22.2 1.0 CG A:GLU52 4.6 29.6 1.0 CA A:ALA36 4.6 18.6 1.0 CB A:GLU52 4.8 29.4 1.0 OE1 A:GLU56 4.8 35.5 1.0 O A:HOH420 4.8 41.3 1.0 OE1 A:GLU55 4.9 55.3 1.0 OE2 A:GLU108 4.9 46.6 1.0

Calcium binding site 2 out of 2 in the Crystal Structure of A Putativel Nudix Hydrolase (LMOF2365_2679) From Listeria Monocytogenes Str. 4B F2365 at 1.70 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of A Putativel Nudix Hydrolase (LMOF2365_2679) From Listeria Monocytogenes Str. 4B F2365 at 1.70 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca201 b:44.0 occ:1.00 O B:ALA36 2.4 26.3 1.0 OE2 B:GLU56 2.6 32.8 1.0 OE1 B:GLU52 2.7 34.5 1.0 O B:HOH403 2.7 38.8 1.0 OE1 B:GLU108 3.0 73.9 1.0 O B:HOH441 3.1 44.8 1.0 CD B:GLU56 3.5 39.4 1.0 C B:ALA36 3.6 25.3 1.0 CD B:GLU52 3.8 34.9 1.0 CD B:GLU108 3.8 66.7 1.0 OE2 B:GLU108 3.9 91.8 1.0 CA B:GLY37 4.1 24.6 1.0 CG B:GLU56 4.1 27.4 1.0 N B:GLY37 4.3 24.8 1.0 OE2 B:GLU52 4.4 56.8 1.0 O B:HOH466 4.4 55.6 1.0 OE1 B:GLU56 4.5 32.0 1.0 N B:ALA36 4.7 19.5 1.0 CA B:ALA36 4.7 25.3 1.0 CG B:GLU52 4.9 27.4 1.0 O B:HOH392 5.0 37.4 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.