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Calcium in PDB 3u4j: Crystal Structure of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti

Protein crystallography data

The structure of Crystal Structure of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti, PDB code: 3u4j was solved by S.Eswaramoorthy, S.Chamala, B.Evans, R.Foti, A.Gizzi, B.Hillerich, A.Kar, J.Lafleur, R.Seidel, G.Villigas, W.Zencheck, S.C.Almo, S.Swaminathan, Newyork Structural Genomics Research Consortium (Nysgrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.98 / 2.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 79.108, 176.660, 83.662, 90.00, 98.49, 90.00
R / Rfree (%) 18.7 / 22.4

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti (pdb code 3u4j). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti, PDB code: 3u4j:

Calcium binding site 1 out of 1 in 3u4j

Go back to Calcium Binding Sites List in 3u4j
Calcium binding site 1 out of 1 in the Crystal Structure of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca601

b:15.8
occ:1.00
OE2 A:GLU48 2.3 18.9 1.0
O A:LEU15 2.4 13.1 1.0
O A:HOH537 2.4 12.9 1.0
O A:HOH630 2.5 21.6 1.0
O A:HOH600 2.5 17.8 1.0
CD A:GLU48 3.6 19.4 1.0
C A:LEU15 3.6 13.2 1.0
CA A:ARG16 4.3 12.0 1.0
OE1 A:GLU48 4.3 21.9 1.0
CE A:LYS18 4.4 28.3 1.0
N A:ARG16 4.4 12.7 1.0
CB A:GLU48 4.4 15.1 1.0
C A:ARG16 4.4 12.5 1.0
O A:ARG16 4.5 12.3 1.0
CG A:GLU48 4.6 17.0 1.0
CA A:GLU48 4.6 14.7 1.0
O A:VAL49 4.6 10.4 1.0
CD A:LYS18 4.6 23.1 1.0
CA A:LEU15 4.7 13.3 1.0
N A:VAL49 4.7 12.9 1.0
CB A:LEU15 4.8 13.9 1.0

Reference:

S.Eswaramoorthy, S.C.Almo, S.Swaminathan. Crystal Structure of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti To Be Published.
Page generated: Sat Jul 13 20:01:24 2024

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