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Calcium in PDB 3uba: Crystal Structure of the Complex of Bovine Lactoperoxidase with P- Hydroxycinnamic Acid at 2.6 A Resolution

Enzymatic activity of Crystal Structure of the Complex of Bovine Lactoperoxidase with P- Hydroxycinnamic Acid at 2.6 A Resolution

All present enzymatic activity of Crystal Structure of the Complex of Bovine Lactoperoxidase with P- Hydroxycinnamic Acid at 2.6 A Resolution:
1.11.1.7;

Protein crystallography data

The structure of Crystal Structure of the Complex of Bovine Lactoperoxidase with P- Hydroxycinnamic Acid at 2.6 A Resolution, PDB code: 3uba was solved by N.Pandey, A.K.Singh, R.P.Singh, M.Sinha, P.Kaur, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.99 / 2.65
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 54.050, 80.230, 76.100, 90.00, 103.33, 90.00
R / Rfree (%) 21.9 / 23.8

Other elements in 3uba:

The structure of Crystal Structure of the Complex of Bovine Lactoperoxidase with P- Hydroxycinnamic Acid at 2.6 A Resolution also contains other interesting chemical elements:

Iodine (I) 9 atoms
Iron (Fe) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Complex of Bovine Lactoperoxidase with P- Hydroxycinnamic Acid at 2.6 A Resolution (pdb code 3uba). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the Complex of Bovine Lactoperoxidase with P- Hydroxycinnamic Acid at 2.6 A Resolution, PDB code: 3uba:

Calcium binding site 1 out of 1 in 3uba

Go back to Calcium Binding Sites List in 3uba
Calcium binding site 1 out of 1 in the Crystal Structure of the Complex of Bovine Lactoperoxidase with P- Hydroxycinnamic Acid at 2.6 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Complex of Bovine Lactoperoxidase with P- Hydroxycinnamic Acid at 2.6 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca606

b:39.5
occ:1.00
 OD1 A:ASP188 2.2 45.1 1.0
O A:THR184 2.3 32.5 1.0
O A:PHE186 2.4 31.8 1.0
O A:ASP110 2.5 30.0 1.0
OD1 A:ASP110 2.6 46.0 1.0
OG1 A:THR184 2.6 31.9 1.0
OG A:SER190 2.6 47.2 1.0
CG A:ASP188 3.2 44.8 1.0
CB A:SER190 3.2 43.3 1.0
C A:THR184 3.3 34.2 1.0
OD2 A:ASP188 3.5 44.0 1.0
C A:ASP110 3.5 35.2 1.0
C A:PHE186 3.6 36.2 1.0
CG A:ASP110 3.7 43.0 1.0
CB A:THR184 3.8 32.2 1.0
CA A:THR184 3.8 33.8 1.0
N A:THR184 3.9 37.6 1.0
N A:PHE186 4.0 34.5 1.0
N A:SER190 4.1 37.5 1.0
N A:ASP188 4.2 37.1 1.0
CA A:SER190 4.3 41.0 1.0
CA A:PHE186 4.3 35.4 1.0
CA A:ASP110 4.3 35.1 1.0
N A:LEU111 4.4 36.1 1.0
N A:SER185 4.5 37.4 1.0
C A:SER185 4.5 35.6 1.0
CB A:ASP188 4.5 42.0 1.0
CB A:ASP110 4.5 36.8 1.0
OD2 A:ASP110 4.6 44.5 1.0
CA A:LEU111 4.6 37.2 1.0
N A:LEU187 4.6 37.8 1.0
CG2 A:THR184 4.8 27.3 1.0
CA A:LEU187 4.8 36.7 1.0
CA A:ASP188 4.8 36.9 1.0
CA A:SER185 4.9 36.6 1.0
CB A:VAL183 4.9 39.1 1.0
C A:VAL183 4.9 38.2 1.0
CB A:PHE186 5.0 35.7 1.0
CG2 A:VAL183 5.0 39.4 1.0

Reference:

N.Pandey, A.K.Singh, R.P.Singh, M.Sinha, P.Kaur, S.Sharma, T.P.Singh. Crystal Structure of the Complex of Bovine Lactoperoxidase with P-Hydroxycinnamic Acid at 2.6 A Resolution To Be Published.
Page generated: Sat Jul 13 20:05:44 2024

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