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Calcium in PDB 3ule: Structure of Bos Taurus ARP2/3 Complex with Bound Inhibitor Ck-869 and Atp

Protein crystallography data

The structure of Structure of Bos Taurus ARP2/3 Complex with Bound Inhibitor Ck-869 and Atp, PDB code: 3ule was solved by B.J.Nolen, M.Han, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 111.166, 128.314, 198.492, 90.00, 90.00, 90.00
R / Rfree (%) 22.3 / 27.4

Other elements in 3ule:

The structure of Structure of Bos Taurus ARP2/3 Complex with Bound Inhibitor Ck-869 and Atp also contains other interesting chemical elements:

Bromine (Br) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of Bos Taurus ARP2/3 Complex with Bound Inhibitor Ck-869 and Atp (pdb code 3ule). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Structure of Bos Taurus ARP2/3 Complex with Bound Inhibitor Ck-869 and Atp, PDB code: 3ule:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 3ule

Go back to Calcium Binding Sites List in 3ule
Calcium binding site 1 out of 2 in the Structure of Bos Taurus ARP2/3 Complex with Bound Inhibitor Ck-869 and Atp


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Bos Taurus ARP2/3 Complex with Bound Inhibitor Ck-869 and Atp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1003

b:61.1
occ:1.00
O1B A:ATP1001 2.6 34.5 1.0
O2G A:ATP1001 2.7 39.8 1.0
O A:HOH1112 3.0 34.7 1.0
OE1 A:GLN144 3.3 43.3 1.0
O A:HOH1115 3.3 42.4 1.0
OD1 A:ASP11 3.9 37.0 1.0
PB A:ATP1001 3.9 36.1 1.0
OD2 A:ASP169 4.2 39.7 1.0
PG A:ATP1001 4.2 39.1 1.0
O3A A:ATP1001 4.2 38.0 1.0
OD1 A:ASP169 4.2 36.7 1.0
OD2 A:ASP11 4.3 36.4 1.0
CD A:GLN144 4.3 37.6 1.0
NZ A:LYS18 4.3 19.7 1.0
O A:HOH1126 4.3 42.0 1.0
O1A A:ATP1001 4.4 32.1 1.0
CG2 A:VAL377 4.5 27.1 1.0
CG A:ASP11 4.5 32.9 1.0
O A:HOH1123 4.5 39.1 1.0
O3B A:ATP1001 4.6 40.5 1.0
CG A:ASP169 4.6 37.7 1.0
O A:HOH1103 4.7 31.6 1.0
O3G A:ATP1001 4.8 43.2 1.0
NE2 A:GLN144 4.8 33.8 1.0
CE A:LYS18 4.8 21.9 1.0
CB A:VAL377 4.9 28.5 1.0
PA A:ATP1001 4.9 33.2 1.0

Calcium binding site 2 out of 2 in 3ule

Go back to Calcium Binding Sites List in 3ule
Calcium binding site 2 out of 2 in the Structure of Bos Taurus ARP2/3 Complex with Bound Inhibitor Ck-869 and Atp


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Structure of Bos Taurus ARP2/3 Complex with Bound Inhibitor Ck-869 and Atp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca402

b:70.9
occ:1.00
O2B B:ATP401 2.7 47.2 1.0
O3G B:ATP401 2.8 54.3 1.0
PG B:ATP401 3.7 51.7 1.0
O1G B:ATP401 3.7 53.6 1.0
PB B:ATP401 4.0 50.1 1.0
NE2 B:GLN141 4.2 80.0 1.0
OD1 B:ASP158 4.2 55.5 1.0
O2A B:ATP401 4.3 45.1 1.0
O3B B:ATP401 4.3 48.1 1.0
O B:ASN13 4.4 82.7 1.0
OD1 B:ASP12 4.5 82.2 1.0
OD2 B:ASP158 4.6 53.2 1.0
OD2 B:ASP12 4.6 82.5 1.0
CD B:GLN141 4.8 80.3 1.0
CA B:GLY14 4.8 78.7 1.0
OE1 B:GLN141 4.8 80.4 1.0
CG B:ASP158 4.8 53.6 1.0
O3A B:ATP401 4.9 50.1 1.0
CG B:ASP12 5.0 82.6 1.0

Reference:

B.J.Nolen, M.Han. Structure of Bos Taurus ARP2/3 Complex with Bound Inhibitor Ck-869 and Atp To Be Published.
Page generated: Sat Dec 12 04:33:03 2020

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