Calcium in PDB 3vcz: 1.80 Angstrom Resolution Crystal Structure of A Putative Translation Initiation Inhibitor From Vibrio Vulnificus CMCP6

The structure of 1.80 Angstrom Resolution Crystal Structure of A Putative Translation Initiation Inhibitor From Vibrio Vulnificus CMCP6, PDB code: 3vcz was solved by A.S.Halavaty, G.Minasov, E.V.Filippova, I.Dubrovska, J.Winsor, L.Shuvalova, L.Papazisi, W.F.Anderson, Center For Structural Genomicsof Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.13 / 1.80
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	71.877, 86.580, 68.162, 90.00, 90.67, 90.00
R / Rfree (%)	15.5 / 18.3

The structure of 1.80 Angstrom Resolution Crystal Structure of A Putative Translation Initiation Inhibitor From Vibrio Vulnificus CMCP6 also contains other interesting chemical elements:

Magnesium

(Mg)

1 atom

The binding sites of Calcium atom in the 1.80 Angstrom Resolution Crystal Structure of A Putative Translation Initiation Inhibitor From Vibrio Vulnificus CMCP6 (pdb code 3vcz). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the 1.80 Angstrom Resolution Crystal Structure of A Putative Translation Initiation Inhibitor From Vibrio Vulnificus CMCP6, PDB code: 3vcz:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the 1.80 Angstrom Resolution Crystal Structure of A Putative Translation Initiation Inhibitor From Vibrio Vulnificus CMCP6


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of 1.80 Angstrom Resolution Crystal Structure of A Putative Translation Initiation Inhibitor From Vibrio Vulnificus CMCP6 within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca201 b:21.6 occ:0.50 O B:ALA112 2.4 15.8 1.0 O B:HOH307 2.4 19.0 0.5 O B:HOH383 2.5 26.0 1.0 O C:HOH304 2.6 20.1 1.0 C B:ALA112 3.4 17.2 1.0 CA B:ALA112 3.9 17.0 1.0 CB B:ALA112 4.2 18.2 1.0 O B:HOH321 4.2 29.0 0.5 O B:HOH321 4.5 23.5 0.5 O C:HOH343 4.6 20.3 1.0 N B:ARG113 4.6 15.8 1.0 CB B:ARG113 4.8 15.6 1.0 O C:HOH344 4.8 22.2 1.0 OE2 C:GLU110 4.9 21.6 1.0 CA B:ARG113 5.0 16.2 1.0

Calcium binding site 2 out of 2 in the 1.80 Angstrom Resolution Crystal Structure of A Putative Translation Initiation Inhibitor From Vibrio Vulnificus CMCP6


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of 1.80 Angstrom Resolution Crystal Structure of A Putative Translation Initiation Inhibitor From Vibrio Vulnificus CMCP6 within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca201 b:29.5 occ:0.90 O C:HOH324 2.3 38.9 1.0 O C:HOH315 2.3 28.7 1.0 O C:HOH372 2.4 37.4 1.0 O C:HOH371 2.4 54.5 1.0 O C:HOH312 2.5 26.7 1.0 OD1 C:ASN93 2.5 18.8 1.0 CG C:ASN93 3.4 21.4 1.0 O C:HOH365 3.5 48.1 1.0 ND2 C:ASN93 3.9 18.2 1.0 O C:HOH367 4.0 41.1 1.0 OE2 C:GLU89 4.2 38.6 1.0 OD2 C:ASP96 4.3 25.9 1.0 O C:HOH404 4.6 64.7 1.0 CB C:ASN93 4.7 20.1 1.0 CA C:ASN93 5.0 20.4 1.0

A.S.Halavaty, G.Minasov, E.V.Filippova, I.Dubrovska, J.Winsor, L.Shuvalova, L.Papazisi, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). 1.80 Angstrom Resolution Crystal Structure of A Putative Translation Initiation Inhibitor From Vibrio Vulnificus CMCP6 To Be Published.