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Calcium in PDB 3vob: Staphylococcus Aureus Ftsz with PC190723

Protein crystallography data

The structure of Staphylococcus Aureus Ftsz with PC190723, PDB code: 3vob was solved by J.Yamane, T.Matsui, N.Mogi, H.Yamaguchi, H.Takemoto, M.Yao, I.Tanaka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.35 / 2.70
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 72.095, 50.507, 88.288, 90.00, 110.95, 90.00
R / Rfree (%) 19.5 / 24.7

Other elements in 3vob:

The structure of Staphylococcus Aureus Ftsz with PC190723 also contains other interesting chemical elements:

Fluorine (F) 2 atoms
Chlorine (Cl) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Staphylococcus Aureus Ftsz with PC190723 (pdb code 3vob). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Staphylococcus Aureus Ftsz with PC190723, PDB code: 3vob:

Calcium binding site 1 out of 1 in 3vob

Go back to Calcium Binding Sites List in 3vob
Calcium binding site 1 out of 1 in the Staphylococcus Aureus Ftsz with PC190723


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Staphylococcus Aureus Ftsz with PC190723 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca401

b:40.5
occ:1.00
O A:VAL203 2.1 28.7 1.0
O A:LEU200 2.3 27.3 1.0
OD1 A:ASN208 2.6 22.6 1.0
O A:LEU209 2.8 18.8 1.0
O A:9PC403 3.1 29.6 1.0
O A:HOH514 3.1 20.3 1.0
C A:VAL203 3.3 26.9 1.0
CG A:ASN208 3.5 21.6 1.0
C A:LEU200 3.5 25.9 1.0
ND2 A:ASN208 3.7 19.0 1.0
CA A:SER204 4.0 21.3 1.0
C A:LEU209 4.0 19.0 1.0
N A:SER204 4.0 25.2 1.0
O A:ILE201 4.1 23.9 1.0
C A:9PC403 4.2 31.8 1.0
N A:VAL203 4.3 23.6 1.0
C A:ILE201 4.3 25.5 1.0
CA A:VAL203 4.3 25.7 1.0
F A:9PC403 4.4 31.7 1.0
N A:ILE201 4.4 24.1 1.0
N A:GLY205 4.4 24.1 1.0
CA A:ILE201 4.4 24.5 1.0
CA A:LEU200 4.5 26.7 1.0
C1 A:9PC403 4.6 30.7 1.0
N A:LEU209 4.7 25.0 1.0
CA A:ASP210 4.7 19.0 1.0
C A:SER204 4.7 22.8 1.0
C2 A:9PC403 4.7 31.2 1.0
CB A:ASP210 4.8 17.7 1.0
N A:ASP210 4.8 17.5 1.0
CB A:ASN208 4.9 22.5 1.0
CA A:LEU209 5.0 23.7 1.0

Reference:

T.Matsui, J.Yamane, N.Mogi, H.Yamaguchi, H.Takemoto, M.Yao, I.Tanaka. Structural Reorganization of the Bacterial Cell-Division Protein Ftsz From Staphylococcus Aureus Acta Crystallogr.,Sect.D V. 68 1175 2012.
ISSN: ISSN 0907-4449
PubMed: 22948918
DOI: 10.1107/S0907444912022640
Page generated: Sat Dec 12 04:34:30 2020

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