Calcium in PDB 3zpp: Structure of the Streptococcus Pneumoniae Surface Protein and Adhesin Pfba

Protein crystallography data

The structure of Structure of the Streptococcus Pneumoniae Surface Protein and Adhesin Pfba, PDB code: 3zpp was solved by M.D.L Suits, A.B.Boraston, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 57.44 / 2.28
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 62.840, 140.650, 128.640, 90.00, 90.00, 90.00
R / Rfree (%) 20.804 / 25.51

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of the Streptococcus Pneumoniae Surface Protein and Adhesin Pfba (pdb code 3zpp). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of the Streptococcus Pneumoniae Surface Protein and Adhesin Pfba, PDB code: 3zpp:

Calcium binding site 1 out of 1 in 3zpp

Go back to Calcium Binding Sites List in 3zpp
Calcium binding site 1 out of 1 in the Structure of the Streptococcus Pneumoniae Surface Protein and Adhesin Pfba


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of the Streptococcus Pneumoniae Surface Protein and Adhesin Pfba within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca601

b:40.2
occ:1.00
O A:HOH2011 1.8 38.0 1.0
O A:THR225 2.1 39.2 1.0
OE2 A:GLU187 2.2 42.4 1.0
O A:HOH2010 2.3 41.6 1.0
NE2 A:HIS214 2.3 44.0 1.0
O A:HOH2009 2.4 27.8 1.0
CD A:GLU187 3.1 39.4 1.0
C A:THR225 3.1 41.1 1.0
CD2 A:HIS214 3.2 47.2 1.0
OE1 A:GLU187 3.3 39.5 1.0
CE1 A:HIS214 3.3 44.7 1.0
CA A:THR225 3.6 39.6 1.0
OD1 A:ASP226 4.1 42.0 1.0
N A:ASP226 4.3 41.5 1.0
CG A:HIS214 4.4 42.4 1.0
ND1 A:HIS214 4.4 42.6 1.0
CG A:GLU187 4.5 33.6 1.0
O A:PHE224 4.5 48.8 1.0
N A:THR225 4.5 41.2 1.0
CD1 A:ILE211 4.5 53.2 1.0
CG A:ASP226 4.6 42.8 1.0
CD1 A:PHE224 4.6 36.2 1.0
CB A:THR225 4.7 42.8 1.0
CE1 A:PHE224 4.8 31.9 1.0
OD2 A:ASP226 4.9 44.7 1.0
C A:PHE224 4.9 40.8 1.0
CA A:ASP226 4.9 39.4 1.0

Reference:

M.D.Suits, A.B.Boraston. Structure of the Streptococcus Pneumoniae Surface Protein and Adhesin Pfba. Plos One V. 8 67190 2013.
ISSN: ISSN 1932-6203
PubMed: 23894284
DOI: 10.1371/JOURNAL.PONE.0067190
Page generated: Sat Dec 12 04:37:26 2020

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