Atomistry » Calcium » PDB 3zni-4a08 » 3zq9
Atomistry »
  Calcium »
    PDB 3zni-4a08 »
      3zq9 »

Calcium in PDB 3zq9: Structure of A Paenibacillus Polymyxa Xyloglucanase From Glycoside Hydrolase Family 44

Enzymatic activity of Structure of A Paenibacillus Polymyxa Xyloglucanase From Glycoside Hydrolase Family 44

All present enzymatic activity of Structure of A Paenibacillus Polymyxa Xyloglucanase From Glycoside Hydrolase Family 44:
3.2.1.151; 3.2.1.4;

Protein crystallography data

The structure of Structure of A Paenibacillus Polymyxa Xyloglucanase From Glycoside Hydrolase Family 44, PDB code: 3zq9 was solved by A.Ariza, J.M.Eklof, O.Spadiut, W.A.Offen, S.M.Roberts, W.Besenmatter, E.P.Friis, M.Skjot, K.S.Wilson, H.Brumer, G.Davies, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.23 / 1.86
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 83.610, 83.610, 157.531, 90.00, 90.00, 120.00
R / Rfree (%) 13.7 / 17.1

Other elements in 3zq9:

The structure of Structure of A Paenibacillus Polymyxa Xyloglucanase From Glycoside Hydrolase Family 44 also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of A Paenibacillus Polymyxa Xyloglucanase From Glycoside Hydrolase Family 44 (pdb code 3zq9). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of A Paenibacillus Polymyxa Xyloglucanase From Glycoside Hydrolase Family 44, PDB code: 3zq9:

Calcium binding site 1 out of 1 in 3zq9

Go back to Calcium Binding Sites List in 3zq9
Calcium binding site 1 out of 1 in the Structure of A Paenibacillus Polymyxa Xyloglucanase From Glycoside Hydrolase Family 44


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of A Paenibacillus Polymyxa Xyloglucanase From Glycoside Hydrolase Family 44 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1521

b:8.8
occ:1.00
O A:TYR156 2.3 8.1 1.0
O A:ASP151 2.3 11.2 1.0
OD1 A:ASP154 2.4 9.2 1.0
O A:HOH2125 2.4 9.1 1.0
O A:HOH2126 2.4 8.7 1.0
OE1 A:GLU56 2.5 6.9 1.0
OE2 A:GLU56 2.5 8.1 1.0
CD A:GLU56 2.8 7.5 1.0
CG A:ASP154 3.4 10.9 1.0
C A:TYR156 3.5 8.4 1.0
C A:ASP151 3.6 12.3 1.0
OD2 A:ASP154 3.8 10.7 1.0
N A:TYR156 4.2 9.2 1.0
O A:HOH2116 4.3 9.3 1.0
CG A:GLU56 4.3 7.6 1.0
CA A:TYR156 4.4 8.8 1.0
CA A:ASP151 4.4 12.6 1.0
O A:ASP154 4.5 10.8 1.0
N A:VAL157 4.5 8.3 1.0
N A:LEU152 4.5 12.5 1.0
CB A:ASP151 4.5 13.6 1.0
CA A:LEU152 4.5 13.6 1.0
CA A:VAL157 4.6 7.9 0.5
CA A:VAL157 4.6 8.0 0.5
N A:ASP151 4.6 11.8 1.0
O A:HOH2287 4.6 9.8 1.0
CG2 A:VAL157 4.7 8.2 0.5
N A:ASP154 4.7 13.1 1.0
CB A:TYR156 4.7 9.1 1.0
CB A:ASP154 4.7 11.1 1.0
C A:ASP154 4.7 11.2 1.0
CG1 A:VAL157 4.8 8.0 0.5
O A:HOH2122 4.8 9.1 1.0
C A:LEU152 4.8 14.7 1.0
CA A:ASP154 5.0 12.0 1.0

Reference:

A.Ariza, J.M.Eklof, O.Spadiut, W.A.Offen, S.M.Roberts, W.Besenmatter, E.P.Friis, M.Skjot, K.S.Wilson, H.Brumer, G.Davies. Structure and Activity of Paenibacillus Polymyxa Xyloglucanase From Glycoside Hydrolase Family 44. J.Biol.Chem. V. 286 33890 2011.
ISSN: ISSN 0021-9258
PubMed: 21795708
DOI: 10.1074/JBC.M111.262345
Page generated: Sat Dec 12 04:37:28 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy