Calcium in PDB 3zr6: Structure of Galactocerebrosidase From Mouse in Complex with Galactose

All present enzymatic activity of Structure of Galactocerebrosidase From Mouse in Complex with Galactose:
3.2.1.46;

The structure of Structure of Galactocerebrosidase From Mouse in Complex with Galactose, PDB code: 3zr6 was solved by J.E.Deane, S.C.Graham, N.N.Kim, P.E.Stein, R.Mcnair, M.B.Cachon-Gonzalez, T.M.Cox, R.J.Read, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	62.95 / 2.44
Space group	H 3 2
Cell size a, b, c (Å), α, β, γ (°)	249.548, 249.548, 77.456, 90.00, 90.00, 120.00
R / Rfree (%)	17.8 / 22.3

The binding sites of Calcium atom in the Structure of Galactocerebrosidase From Mouse in Complex with Galactose (pdb code 3zr6). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of Galactocerebrosidase From Mouse in Complex with Galactose, PDB code: 3zr6:

Calcium binding site 1 out of 1 in the Structure of Galactocerebrosidase From Mouse in Complex with Galactose


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Galactocerebrosidase From Mouse in Complex with Galactose within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca709 b:98.5 occ:1.00 O A:PHE511 2.5 43.9 1.0 O A:HOH4024 2.6 71.3 1.0 OD1 A:ASN479 2.7 51.0 1.0 OD1 A:ASP660 2.7 45.9 1.0 OD2 A:ASP660 3.0 54.4 1.0 O A:HOH4005 3.0 54.6 1.0 O A:ASP477 3.0 52.3 1.0 CG A:ASP660 3.2 49.0 1.0 C A:PHE511 3.6 43.3 1.0 CG A:ASN479 3.7 53.1 1.0 N A:PHE511 4.0 48.0 1.0 ND2 A:ASN479 4.0 51.7 1.0 CA A:PHE511 4.1 42.4 1.0 CB A:PHE511 4.1 39.8 1.0 C A:ASP477 4.3 52.8 1.0 OD1 A:ASN661 4.4 51.8 1.0 CB A:ASP660 4.7 47.2 1.0 N A:THR512 4.7 41.6 1.0 N A:ARG510 4.7 58.0 1.0 CA A:HIS509 4.7 53.1 1.0 O A:GLU508 4.8 61.9 1.0 CG2 A:THR512 4.8 42.4 1.0 C A:HIS509 4.9 53.4 1.0 N A:ASN479 5.0 53.2 1.0 CB A:ASP477 5.0 54.8 1.0 CB A:ASN479 5.0 55.4 1.0 CG A:ASN661 5.0 50.0 1.0

J.E.Deane, S.C.Graham, N.N.Kim, P.E.Stein, R.Mcnair, M.B.Cachon-Gonzalez, T.M.Cox, R.J.Read. Insights Into Krabbe Disease From Structures of Galactocerebrosidase. Proc.Natl.Acad.Sci.Usa V. 108 15169 2011.
ISSN: ISSN 0027-8424
PubMed: 21876145
DOI: 10.1073/PNAS.1105639108