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Calcium in PDB 3zzr: Crystal Structure of the CG11501 Protein in P21212 Spacegroup

Protein crystallography data

The structure of Crystal Structure of the CG11501 Protein in P21212 Spacegroup, PDB code: 3zzr was solved by F.Coste, A.Roussel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.45
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 49.430, 78.290, 21.720, 90.00, 90.00, 90.00
R / Rfree (%) 15.969 / 19.572

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the CG11501 Protein in P21212 Spacegroup (pdb code 3zzr). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of the CG11501 Protein in P21212 Spacegroup, PDB code: 3zzr:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 3zzr

Go back to Calcium Binding Sites List in 3zzr
Calcium binding site 1 out of 2 in the Crystal Structure of the CG11501 Protein in P21212 Spacegroup


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the CG11501 Protein in P21212 Spacegroup within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca200

b:13.0
occ:1.00
OE1 A:GLU25 2.2 28.3 1.0
O A:HOH2003 2.4 37.2 1.0
CD A:GLU25 2.9 25.5 1.0
OE2 A:GLU25 2.9 32.1 1.0
O A:HOH2002 3.8 23.3 1.0
CG A:GLU25 4.4 20.2 1.0
O A:HOH2005 4.5 23.9 1.0
O A:HOH2001 4.7 16.1 1.0
CB A:GLU25 4.8 17.4 1.0
O A:HOH2004 5.0 29.2 1.0

Calcium binding site 2 out of 2 in 3zzr

Go back to Calcium Binding Sites List in 3zzr
Calcium binding site 2 out of 2 in the Crystal Structure of the CG11501 Protein in P21212 Spacegroup


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of the CG11501 Protein in P21212 Spacegroup within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca201

b:18.4
occ:0.50
O A:HOH2110 2.0 19.9 1.0
OD2 A:ASP91 2.3 11.5 1.0
CG A:ASP91 2.8 11.1 1.0
OD1 A:ASP91 2.9 12.6 1.0
OE1 A:GLN94 3.5 22.7 1.0
CD A:GLN94 4.1 19.4 1.0
NE2 A:GLN94 4.2 26.6 1.0
CB A:ASP91 4.2 8.5 1.0
NH2 A:ARG98 4.3 16.2 1.0
NH1 A:ARG98 4.5 12.2 1.0
CZ A:ARG98 4.9 12.9 1.0

Reference:

F.Coste, C.Kemp, V.Bobezeau, C.Hetru, C.Kellenberger, J.-L.Imler, A.Roussel. Crystal Structure of Diedel, A Marker of the Immune Response of Drosophila Melanogaster. Plos One V. 7 33416 2012.
ISSN: ISSN 1932-6203
PubMed: 22442689
DOI: 10.1371/JOURNAL.PONE.0033416
Page generated: Sat Jul 13 21:50:27 2024

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