Atomistry » Calcium » PDB 4aqi-4ayp » 4aqj
Atomistry »
  Calcium »
    PDB 4aqi-4ayp »
      4aqj »

Calcium in PDB 4aqj: Structure of Human S100A7 D24G Bound to Zinc and Calcium

Protein crystallography data

The structure of Structure of Human S100A7 D24G Bound to Zinc and Calcium, PDB code: 4aqj was solved by J.I.Murray, M.L.Tonkin, A.L.Whiting, F.Peng, B.Farnell, F.Hof, M.J.Boulanger, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.76 / 1.60
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 51.480, 51.480, 117.230, 90.00, 90.00, 90.00
R / Rfree (%) 18.901 / 22.532

Other elements in 4aqj:

The structure of Structure of Human S100A7 D24G Bound to Zinc and Calcium also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Zinc (Zn) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of Human S100A7 D24G Bound to Zinc and Calcium (pdb code 4aqj). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of Human S100A7 D24G Bound to Zinc and Calcium, PDB code: 4aqj:

Calcium binding site 1 out of 1 in 4aqj

Go back to Calcium Binding Sites List in 4aqj
Calcium binding site 1 out of 1 in the Structure of Human S100A7 D24G Bound to Zinc and Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Human S100A7 D24G Bound to Zinc and Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1097

b:19.9
occ:1.00
O A:LYS68 2.3 20.9 1.0
OD1 A:ASP62 2.4 16.6 1.0
O A:HOH2113 2.4 20.4 1.0
OE1 A:GLU73 2.4 19.0 1.0
OD1 A:ASN64 2.4 21.0 1.0
OD1 A:ASP66 2.4 22.7 1.0
OE2 A:GLU73 2.5 17.9 1.0
CD A:GLU73 2.8 19.8 1.0
CG A:ASP66 3.3 28.4 1.0
CG A:ASN64 3.5 24.1 1.0
CG A:ASP62 3.5 16.2 1.0
C A:LYS68 3.5 20.9 1.0
OD2 A:ASP66 3.7 24.3 1.0
ND2 A:ASN64 4.0 30.8 1.0
CA A:ASP62 4.1 17.8 1.0
N A:LYS68 4.2 20.9 1.0
N A:ASP66 4.3 23.9 1.0
CB A:ASP62 4.3 17.5 1.0
C A:ASP62 4.4 18.4 1.0
N A:ASN64 4.4 22.1 1.0
CG A:GLU73 4.4 17.4 1.0
CA A:ILE69 4.4 16.7 1.0
OD2 A:ASP62 4.4 20.7 1.0
CA A:LYS68 4.4 22.1 1.0
N A:ILE69 4.4 18.4 1.0
N A:ASP70 4.5 18.1 1.0
CB A:ASP66 4.5 25.2 1.0
N A:LYS63 4.5 18.9 1.0
N A:GLU65 4.6 24.0 1.0
OD2 A:ASP70 4.6 22.9 1.0
CB A:ASN64 4.7 21.8 1.0
CB A:LYS68 4.7 24.2 1.0
CA A:ASP66 4.8 24.1 1.0
CA A:ASN64 4.8 22.4 1.0
C A:ASN64 4.8 24.3 1.0
CG A:ASP70 4.9 21.8 1.0
N A:LYS67 4.9 21.4 1.0
O A:HOH2127 4.9 25.3 1.0
C A:ILE69 4.9 17.4 1.0
C A:ASP66 5.0 22.6 1.0
O A:ASP62 5.0 18.9 1.0

Reference:

J.I.Murray, M.L.Tonkin, A.L.Whiting, F.Peng, B.Farnell, J.T.Cullen, F.Hof, M.J.Boulanger. Structural Characterization of S100A15 Reveals A Novel Zinc Coordination Site Among S100 Proteins and Altered Surface Chemistry with Functional Implications For Receptor Binding. Bmc Struct.Biol. V. 12 16 2012.
ISSN: ISSN 1472-6807
PubMed: 22747601
DOI: 10.1186/1472-6807-12-16
Page generated: Sat Dec 12 04:39:26 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy