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Calcium in PDB 4ar2: Dodecahedron Formed of Penton Base Protein From Adenovirus AD3

Protein crystallography data

The structure of Dodecahedron Formed of Penton Base Protein From Adenovirus AD3, PDB code: 4ar2 was solved by W.P.Burmeister, E.Szolajska, M.Zochowska, B.Nerlo, I.Andreev, G.Schoehn, J.-P.Andrieu, P.Fender, A.Naskalska, C.Zubieta, S.Cusack, J.Chroboczek, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 258.20 / 3.80
Space group P 21 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 346.040, 348.550, 372.870, 90.00, 90.00, 90.00
R / Rfree (%) 28 / 27.8

Calcium Binding Sites:

The binding sites of Calcium atom in the Dodecahedron Formed of Penton Base Protein From Adenovirus AD3 (pdb code 4ar2). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Dodecahedron Formed of Penton Base Protein From Adenovirus AD3, PDB code: 4ar2:

Calcium binding site 1 out of 1 in 4ar2

Go back to Calcium Binding Sites List in 4ar2
Calcium binding site 1 out of 1 in the Dodecahedron Formed of Penton Base Protein From Adenovirus AD3


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Dodecahedron Formed of Penton Base Protein From Adenovirus AD3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca999

b:72.0
occ:0.20
OE1 A:GLU451 3.7 0.4 1.0
CD A:GLU451 4.9 0.7 1.0

Reference:

E.Szolajska, W.P.Burmeister, M.Zochowska, B.Nerlo, I.Andreev, G.Schoehn, J.P.Andrieu, P.Fender, A.Naskalska, C.Zubieta, S.Cusack, J.Chroboczek. The Structural Basis For the Integrity of Adenovirus AD3 Dodecahedron. Plos One V. 7 46075 2012.
ISSN: ESSN 1932-6203
PubMed: 23049939
DOI: 10.1371/JOURNAL.PONE.0046075
Page generated: Sat Dec 12 04:39:31 2020

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