Calcium in PDB 4bq1: Crystal Structure of of Lamacat From Zobellia Galactanivorans

All present enzymatic activity of Crystal Structure of of Lamacat From Zobellia Galactanivorans:
3.2.1.39;

The structure of Crystal Structure of of Lamacat From Zobellia Galactanivorans, PDB code: 4bq1 was solved by A.Labourel, M.Jam, A.Jeudy, G.Michel, M.Czjzek, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	71.06 / 1.50
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	44.559, 76.564, 142.119, 90.00, 90.00, 90.00
R / Rfree (%)	13.752 / 16.64

The binding sites of Calcium atom in the Crystal Structure of of Lamacat From Zobellia Galactanivorans (pdb code 4bq1). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of of Lamacat From Zobellia Galactanivorans, PDB code: 4bq1:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Crystal Structure of of Lamacat From Zobellia Galactanivorans


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of of Lamacat From Zobellia Galactanivorans within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca400 b:16.7 occ:0.65 O A:GLY189 2.3 12.9 1.0 O A:ASP377 2.3 10.6 1.0 O A:GLU145 2.3 11.4 1.0 O A:HOH2013 2.4 30.6 1.0 OD1 A:ASP377 2.4 14.7 1.0 O A:HOH2014 2.5 18.1 1.0 C A:ASP377 3.3 11.3 1.0 C A:GLY189 3.4 14.4 1.0 CG A:ASP377 3.4 14.7 1.0 C A:GLU145 3.4 10.8 1.0 CA A:ASP377 3.8 9.7 1.0 O A:HOH2303 4.1 40.1 1.0 CA A:GLU145 4.2 10.3 1.0 CA A:GLY189 4.2 18.6 1.0 CB A:ASP377 4.2 10.6 1.0 CB A:PHE146 4.2 12.2 1.0 OD2 A:ASP377 4.3 16.0 1.0 N A:PHE146 4.4 11.3 1.0 N A:TYR378 4.5 10.2 1.0 N A:THR190 4.5 12.8 1.0 O A:HOH2302 4.5 25.4 1.0 O A:PHE146 4.5 16.4 1.0 CG A:GLU147 4.5 28.2 0.5 C A:PHE146 4.5 14.3 1.0 CB A:GLU145 4.6 11.5 1.0 CA A:THR190 4.6 13.1 1.0 CA A:PHE146 4.6 11.6 1.0 CG A:GLU147 4.6 22.6 0.5 CB A:TYR378 4.7 11.1 1.0 OE1 A:GLU145 4.8 13.6 1.0 CG2 A:THR190 4.8 14.7 1.0 CA A:TYR378 4.8 11.1 1.0 CD A:GLU147 4.9 35.1 0.5

Calcium binding site 2 out of 2 in the Crystal Structure of of Lamacat From Zobellia Galactanivorans


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of of Lamacat From Zobellia Galactanivorans within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca400 b:28.6 occ:0.65 O B:ASP377 2.3 22.5 1.0 OD1 B:ASP377 2.3 28.2 1.0 O B:GLY189 2.3 27.2 1.0 O B:GLU145 2.4 28.0 1.0 O B:HOH2011 2.5 34.0 1.0 C B:ASP377 3.3 22.8 1.0 CG B:ASP377 3.3 27.1 1.0 C B:GLY189 3.5 29.7 1.0 C B:GLU145 3.5 23.8 1.0 O B:HOH2061 3.6 53.2 1.0 CA B:ASP377 3.7 21.9 1.0 CB B:ASP377 4.1 24.9 1.0 CA B:GLU145 4.2 25.3 1.0 CA B:GLY189 4.2 29.1 1.0 OD2 B:ASP377 4.2 27.7 1.0 O B:HOH2209 4.4 35.7 1.0 CB B:PHE146 4.4 26.6 1.0 N B:TYR378 4.4 21.8 1.0 N B:THR190 4.5 26.8 1.0 CG B:GLU147 4.5 39.9 1.0 N B:PHE146 4.6 25.1 1.0 O B:PHE146 4.6 28.8 1.0 CA B:THR190 4.6 25.4 1.0 CB B:GLU145 4.6 25.6 1.0 CG2 B:THR190 4.7 27.8 1.0 C B:PHE146 4.7 33.4 1.0 CB B:TYR378 4.7 21.4 1.0 OE2 B:GLU147 4.7 53.5 1.0 OE1 B:GLU145 4.8 29.5 1.0 CA B:TYR378 4.8 21.1 1.0 CA B:PHE146 4.8 28.1 1.0

A.Labourel, M.Jam, A.Jeudy, J.H.Hehemann, M.Czjzek, G.Michel. The Beta Glucanase Zglama From Zobellia Galactanivorans Evolved A Bent Active Site Adapted For Efficient Degradation of Algal Laminarin J.Biol.Chem. V. 289 2027 2014.
ISSN: ISSN 0021-9258
PubMed: 24337571
DOI: 10.1074/JBC.M113.538843