Calcium in PDB 4bya: Calmodulin, C-Terminal Domain, M144H Mutant
Calcium Binding Sites:
The binding sites of Calcium atom in the Calmodulin, C-Terminal Domain, M144H Mutant
(pdb code 4bya). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the
Calmodulin, C-Terminal Domain, M144H Mutant, PDB code: 4bya:
Jump to Calcium binding site number:
1;
2;
Calcium binding site 1 out
of 2 in 4bya
Go back to
Calcium Binding Sites List in 4bya
Calcium binding site 1 out
of 2 in the Calmodulin, C-Terminal Domain, M144H Mutant
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Calmodulin, C-Terminal Domain, M144H Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca76
b:0.0
occ:1.00
|
OE1
|
A:GLU31
|
2.2
|
0.0
|
1.0
|
OD1
|
A:ASP22
|
2.3
|
0.0
|
1.0
|
OD1
|
A:ASP20
|
2.3
|
0.0
|
1.0
|
OD1
|
A:ASN24
|
2.3
|
0.0
|
1.0
|
OE2
|
A:GLU31
|
2.3
|
0.0
|
1.0
|
O
|
A:TYR26
|
2.4
|
0.0
|
1.0
|
CD
|
A:GLU31
|
2.6
|
0.0
|
1.0
|
OD2
|
A:ASP20
|
2.6
|
0.0
|
1.0
|
OD2
|
A:ASP22
|
2.7
|
0.0
|
1.0
|
CG
|
A:ASP20
|
2.7
|
0.0
|
1.0
|
CG
|
A:ASP22
|
2.7
|
0.0
|
1.0
|
H
|
A:ASN24
|
3.1
|
0.0
|
1.0
|
H
|
A:ASP22
|
3.3
|
0.0
|
1.0
|
H
|
A:TYR26
|
3.4
|
0.0
|
1.0
|
CG
|
A:ASN24
|
3.4
|
0.0
|
1.0
|
C
|
A:TYR26
|
3.6
|
0.0
|
1.0
|
HA
|
A:ILE27
|
3.7
|
0.0
|
1.0
|
HA
|
A:ASP20
|
3.7
|
0.0
|
1.0
|
H
|
A:GLY23
|
3.8
|
0.0
|
1.0
|
H
|
A:GLY25
|
3.9
|
0.0
|
1.0
|
CB
|
A:ASP20
|
4.0
|
0.0
|
1.0
|
N
|
A:ASN24
|
4.0
|
0.0
|
1.0
|
H
|
A:SER28
|
4.0
|
0.0
|
1.0
|
HD22
|
A:ASN24
|
4.1
|
0.0
|
1.0
|
CG
|
A:GLU31
|
4.1
|
0.0
|
1.0
|
HG
|
A:SER28
|
4.1
|
0.0
|
1.0
|
CB
|
A:ASP22
|
4.1
|
0.0
|
1.0
|
N
|
A:ASP22
|
4.1
|
0.0
|
1.0
|
ND2
|
A:ASN24
|
4.2
|
0.0
|
1.0
|
N
|
A:TYR26
|
4.2
|
0.0
|
1.0
|
CA
|
A:ASP20
|
4.3
|
0.0
|
1.0
|
HB2
|
A:TYR26
|
4.3
|
0.0
|
1.0
|
H
|
A:LYS21
|
4.3
|
0.0
|
1.0
|
N
|
A:GLY23
|
4.3
|
0.0
|
1.0
|
CB
|
A:ASN24
|
4.3
|
0.0
|
1.0
|
HB3
|
A:ASN24
|
4.4
|
0.0
|
1.0
|
HG2
|
A:GLU31
|
4.4
|
0.0
|
1.0
|
HB2
|
A:ASP20
|
4.4
|
0.0
|
1.0
|
CA
|
A:TYR26
|
4.4
|
0.0
|
1.0
|
HG3
|
A:GLU31
|
4.5
|
0.0
|
1.0
|
N
|
A:ILE27
|
4.5
|
0.0
|
1.0
|
CA
|
A:ASP22
|
4.5
|
0.0
|
1.0
|
CA
|
A:ILE27
|
4.6
|
0.0
|
1.0
|
N
|
A:GLY25
|
4.6
|
0.0
|
1.0
|
HB3
|
A:ASP22
|
4.6
|
0.0
|
1.0
|
CA
|
A:ASN24
|
4.6
|
0.0
|
1.0
|
N
|
A:LYS21
|
4.6
|
0.0
|
1.0
|
C
|
A:ASP20
|
4.7
|
0.0
|
1.0
|
C
|
A:ASP22
|
4.7
|
0.0
|
1.0
|
HB3
|
A:ASP20
|
4.7
|
0.0
|
1.0
|
HB2
|
A:ASP22
|
4.8
|
0.0
|
1.0
|
N
|
A:SER28
|
4.9
|
0.0
|
1.0
|
CB
|
A:TYR26
|
4.9
|
0.0
|
1.0
|
HB3
|
A:GLU31
|
4.9
|
0.0
|
1.0
|
CB
|
A:GLU31
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 2 out
of 2 in 4bya
Go back to
Calcium Binding Sites List in 4bya
Calcium binding site 2 out
of 2 in the Calmodulin, C-Terminal Domain, M144H Mutant
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Calmodulin, C-Terminal Domain, M144H Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca77
b:0.0
occ:1.00
|
OD1
|
A:ASP58
|
2.2
|
0.0
|
1.0
|
OD1
|
A:ASP60
|
2.2
|
0.0
|
1.0
|
OE1
|
A:GLU67
|
2.2
|
0.0
|
1.0
|
OD1
|
A:ASP56
|
2.3
|
0.0
|
1.0
|
OE2
|
A:GLU67
|
2.5
|
0.0
|
1.0
|
OD2
|
A:ASP56
|
2.6
|
0.0
|
1.0
|
O
|
A:GLN62
|
2.7
|
0.0
|
1.0
|
OD2
|
A:ASP60
|
2.7
|
0.0
|
1.0
|
CG
|
A:ASP60
|
2.7
|
0.0
|
1.0
|
OD2
|
A:ASP58
|
2.7
|
0.0
|
1.0
|
CD
|
A:GLU67
|
2.7
|
0.0
|
1.0
|
CG
|
A:ASP58
|
2.8
|
0.0
|
1.0
|
CG
|
A:ASP56
|
2.8
|
0.0
|
1.0
|
H
|
A:ASP60
|
3.2
|
0.0
|
1.0
|
H
|
A:ASP58
|
3.6
|
0.0
|
1.0
|
H
|
A:GLN62
|
3.6
|
0.0
|
1.0
|
HA
|
A:VAL63
|
3.7
|
0.0
|
1.0
|
C
|
A:GLN62
|
3.7
|
0.0
|
1.0
|
H
|
A:ASN64
|
3.9
|
0.0
|
1.0
|
CB
|
A:ASP60
|
4.0
|
0.0
|
1.0
|
OD1
|
A:ASN64
|
4.0
|
0.0
|
1.0
|
H
|
A:GLY61
|
4.1
|
0.0
|
1.0
|
N
|
A:ASP60
|
4.1
|
0.0
|
1.0
|
H
|
A:GLY59
|
4.1
|
0.0
|
1.0
|
CG
|
A:GLU67
|
4.2
|
0.0
|
1.0
|
CB
|
A:ASP58
|
4.2
|
0.0
|
1.0
|
CB
|
A:ASP56
|
4.3
|
0.0
|
1.0
|
HB3
|
A:ASP60
|
4.3
|
0.0
|
1.0
|
HA
|
A:ASP56
|
4.3
|
0.0
|
1.0
|
N
|
A:GLN62
|
4.3
|
0.0
|
1.0
|
H
|
A:ILE57
|
4.4
|
0.0
|
1.0
|
N
|
A:ASP58
|
4.4
|
0.0
|
1.0
|
CA
|
A:ASP60
|
4.5
|
0.0
|
1.0
|
CA
|
A:VAL63
|
4.6
|
0.0
|
1.0
|
N
|
A:VAL63
|
4.6
|
0.0
|
1.0
|
N
|
A:GLY59
|
4.6
|
0.0
|
1.0
|
HG3
|
A:GLU67
|
4.6
|
0.0
|
1.0
|
CA
|
A:GLN62
|
4.6
|
0.0
|
1.0
|
N
|
A:GLY61
|
4.7
|
0.0
|
1.0
|
HE2
|
A:TYR26
|
4.7
|
0.0
|
1.0
|
HB3
|
A:ASP58
|
4.7
|
0.0
|
1.0
|
HB2
|
A:GLN62
|
4.7
|
0.0
|
1.0
|
HG2
|
A:GLU67
|
4.7
|
0.0
|
1.0
|
CA
|
A:ASP58
|
4.7
|
0.0
|
1.0
|
CA
|
A:ASP56
|
4.8
|
0.0
|
1.0
|
HB2
|
A:ASP56
|
4.8
|
0.0
|
1.0
|
HB2
|
A:ASP60
|
4.8
|
0.0
|
1.0
|
HB3
|
A:GLU67
|
4.8
|
0.0
|
1.0
|
HB3
|
A:ASP56
|
4.8
|
0.0
|
1.0
|
HD2
|
A:TYR26
|
4.8
|
0.0
|
1.0
|
N
|
A:ASN64
|
4.9
|
0.0
|
1.0
|
HB2
|
A:ASP58
|
4.9
|
0.0
|
1.0
|
N
|
A:ILE57
|
4.9
|
0.0
|
1.0
|
C
|
A:ASP58
|
4.9
|
0.0
|
1.0
|
C
|
A:ASP60
|
4.9
|
0.0
|
1.0
|
CB
|
A:GLU67
|
5.0
|
0.0
|
1.0
|
HB2
|
A:GLU67
|
5.0
|
0.0
|
1.0
|
CG
|
A:ASN64
|
5.0
|
0.0
|
1.0
|
|
Reference:
Y.S.Moroz,
Y.Wu,
N.A.J.Van Nuland,
I.V.Korendovych.
Calmodulin, C-Terminal Domain, M144H Mutant To Be Published.
Page generated: Sat Jul 13 22:52:37 2024
|