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Calcium in PDB 4c1y: Crystal Structure of Fucose Binding Lectin From Aspergillus Fumigatus (Afl) in Complex with B-Methylfucoside

Protein crystallography data

The structure of Crystal Structure of Fucose Binding Lectin From Aspergillus Fumigatus (Afl) in Complex with B-Methylfucoside, PDB code: 4c1y was solved by J.Houser, J.Komarek, N.Kostlanova, M.Lahmann, G.Cioci, A.Varrot, A.Imberty, M.Wimmerova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.14 / 2.23
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 71.211, 90.335, 189.168, 90.00, 90.00, 90.00
R / Rfree (%) 24.255 / 31.339

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Fucose Binding Lectin From Aspergillus Fumigatus (Afl) in Complex with B-Methylfucoside (pdb code 4c1y). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Fucose Binding Lectin From Aspergillus Fumigatus (Afl) in Complex with B-Methylfucoside, PDB code: 4c1y:

Calcium binding site 1 out of 1 in 4c1y

Go back to Calcium Binding Sites List in 4c1y
Calcium binding site 1 out of 1 in the Crystal Structure of Fucose Binding Lectin From Aspergillus Fumigatus (Afl) in Complex with B-Methylfucoside


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Fucose Binding Lectin From Aspergillus Fumigatus (Afl) in Complex with B-Methylfucoside within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1316

b:27.0
occ:1.00
NE2 A:HIS23 2.2 25.6 1.0
O A:HOH2014 2.4 27.3 1.0
O A:HOH2053 2.5 15.2 1.0
O A:HOH2015 2.6 28.6 1.0
CE1 A:HIS23 3.1 26.3 1.0
CD2 A:HIS23 3.2 23.7 1.0
ND1 A:HIS23 4.2 24.2 1.0
CG A:HIS23 4.3 23.3 1.0
OE1 A:GLU41 4.7 22.1 1.0
OD1 A:ASN22 4.9 16.1 1.0

Reference:

J.Houser, J.Komarek, N.Kostlanova, M.Lahmann, G.Cioci, A.Varrot, A.Imberty, M.Wimmerova. Structure of Aspergillus Fumigatus Fucose-Specific Lectin To Be Published.
Page generated: Sat Dec 12 04:41:52 2020

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