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Calcium in PDB 4cid: Structural Insights Into the N-Terminus of the EHD2 Atpase

Enzymatic activity of Structural Insights Into the N-Terminus of the EHD2 Atpase

All present enzymatic activity of Structural Insights Into the N-Terminus of the EHD2 Atpase:
3.6.5.5;

Protein crystallography data

The structure of Structural Insights Into the N-Terminus of the EHD2 Atpase, PDB code: 4cid was solved by C.Shah, O.Daumke, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 78.15 / 3.00
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 99.851, 134.653, 56.068, 90.00, 106.05, 90.00
R / Rfree (%) 23.019 / 27.917

Other elements in 4cid:

The structure of Structural Insights Into the N-Terminus of the EHD2 Atpase also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Structural Insights Into the N-Terminus of the EHD2 Atpase (pdb code 4cid). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structural Insights Into the N-Terminus of the EHD2 Atpase, PDB code: 4cid:

Calcium binding site 1 out of 1 in 4cid

Go back to Calcium Binding Sites List in 4cid
Calcium binding site 1 out of 1 in the Structural Insights Into the N-Terminus of the EHD2 Atpase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structural Insights Into the N-Terminus of the EHD2 Atpase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca701

b:49.3
occ:1.00
O A:MSE500 2.2 53.3 1.0
OD1 A:ASP498 2.3 62.4 1.0
OE1 A:GLU505 2.3 52.7 1.0
OD1 A:ASP496 2.3 60.4 1.0
OD1 A:ASP494 2.6 58.9 1.0
OE2 A:GLU505 2.9 53.6 1.0
CD A:GLU505 2.9 53.0 1.0
C A:MSE500 3.2 53.5 1.0
CG A:ASP496 3.3 61.9 1.0
CG A:ASP498 3.4 63.9 1.0
OD2 A:ASP496 3.6 63.1 1.0
CG A:ASP494 3.7 59.6 1.0
OD2 A:ASP498 3.9 65.0 1.0
CA A:LEU501 4.0 51.8 1.0
N A:LEU501 4.0 53.2 1.0
N A:MSE500 4.1 55.7 1.0
CA A:MSE500 4.2 54.5 1.0
OD2 A:ASP494 4.4 62.9 1.0
N A:ASP498 4.4 62.0 1.0
CG A:GLU505 4.4 52.5 1.0
N A:ASP502 4.5 53.3 1.0
CB A:MSE500 4.5 55.8 1.0
CB A:ASP498 4.6 64.7 1.0
CA A:ASP494 4.6 56.6 1.0
CB A:ASP496 4.7 62.0 1.0
CB A:ASP494 4.7 57.7 1.0
CD2 A:LEU501 4.7 48.4 1.0
C A:LEU501 4.7 52.5 1.0
N A:ARG497 4.7 62.3 1.0
N A:ASP496 4.7 58.0 1.0
N A:GLY499 4.9 58.5 1.0
CA A:ASP498 4.9 63.0 1.0
C A:ASP494 4.9 57.3 1.0
CB A:GLU505 5.0 51.7 1.0

Reference:

C.Shah, B.G.Hegde, B.Mor, E.Behrmann, T.Mielke, G.Moenke, C.M.Spahn, R.Lundmark, O.Daumke, R.Langen. Structural Insights Into Membrane Interaction and Caveolar Targeting of Dynamin-Like EHD2. Structure V. 22 409 2014.
ISSN: ISSN 0969-2126
PubMed: 24508342
DOI: 10.1016/J.STR.2013.12.015
Page generated: Sat Dec 12 04:42:20 2020

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