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Calcium in PDB 4cow: Crystal Structure of Epithelial Adhesin 6 A Domain (EPA6A) From Candida Glabrata in Complex with the T-Antigen (GALB1- 3GALNAC)

Protein crystallography data

The structure of Crystal Structure of Epithelial Adhesin 6 A Domain (EPA6A) From Candida Glabrata in Complex with the T-Antigen (GALB1- 3GALNAC), PDB code: 4cow was solved by M.Kock, M.Maestre-Reyna, R.Diderrich, H.-U.Moesch, L.-O.Essen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.69 / 2.15
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 41.350, 61.100, 106.610, 90.00, 90.00, 90.00
R / Rfree (%) 17.699 / 22.973

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Epithelial Adhesin 6 A Domain (EPA6A) From Candida Glabrata in Complex with the T-Antigen (GALB1- 3GALNAC) (pdb code 4cow). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Epithelial Adhesin 6 A Domain (EPA6A) From Candida Glabrata in Complex with the T-Antigen (GALB1- 3GALNAC), PDB code: 4cow:

Calcium binding site 1 out of 1 in 4cow

Go back to Calcium Binding Sites List in 4cow
Calcium binding site 1 out of 1 in the Crystal Structure of Epithelial Adhesin 6 A Domain (EPA6A) From Candida Glabrata in Complex with the T-Antigen (GALB1- 3GALNAC)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Epithelial Adhesin 6 A Domain (EPA6A) From Candida Glabrata in Complex with the T-Antigen (GALB1- 3GALNAC) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1269

b:13.8
occ:1.00
O A:ASP227 2.3 13.8 1.0
O3 A:GAL1270 2.3 13.9 1.0
OD1 A:ASP164 2.3 17.0 1.0
O4 A:GAL1270 2.3 14.1 1.0
OD1 A:ASN225 2.4 12.2 1.0
O A:ASP229 2.4 15.2 1.0
OD2 A:ASP165 2.4 15.2 1.0
CG A:ASP164 3.3 17.7 1.0
CG A:ASP165 3.3 15.7 1.0
C4 A:GAL1270 3.3 15.4 1.0
C3 A:GAL1270 3.3 15.1 1.0
CG A:ASN225 3.5 12.2 1.0
C A:ASP227 3.5 13.8 1.0
C A:ASP229 3.6 15.4 1.0
OD2 A:ASP164 3.6 18.4 1.0
OD1 A:ASP165 3.7 16.4 1.0
N A:ASP227 4.0 13.2 1.0
C2 A:GAL1270 4.0 16.5 1.0
N A:ASP229 4.0 15.7 1.0
ND2 A:ASN225 4.1 12.3 1.0
C A:ASN228 4.1 15.1 1.0
C A:ASP164 4.3 15.8 1.0
O A:ASP164 4.3 15.6 1.0
N A:ARG226 4.3 12.4 1.0
CA A:ASP229 4.3 16.0 1.0
CA A:ASP227 4.3 13.6 1.0
O A:ASN228 4.4 14.7 1.0
N A:ASP165 4.4 15.2 1.0
CB A:ASP165 4.5 15.3 1.0
N A:ASN228 4.5 14.4 1.0
CB A:ASP164 4.5 17.5 1.0
N A:GLY230 4.6 15.3 1.0
CB A:ASN225 4.6 12.1 1.0
CB A:ASN228 4.6 15.7 1.0
CG A:ARG226 4.6 13.2 1.0
CA A:ASN228 4.6 15.0 1.0
C5 A:GAL1270 4.7 17.1 1.0
CA A:ASN225 4.7 12.1 1.0
O2 A:GAL1270 4.7 15.1 1.0
CA A:ASP165 4.8 15.5 1.0
CA A:GLY230 4.8 15.0 1.0
CA A:ASP164 4.9 16.9 1.0
CB A:ASP227 4.9 13.9 1.0
C A:ASN225 4.9 12.2 1.0

Reference:

R.Diderrich, M.Kock, M.Maestre-Reyna, S.Rupp, L.-O.Essen, H.-U.Moesch. The Structure and Function of the Epithelial Adhesins (Working) To Be Published.
Page generated: Sat Jul 13 23:10:03 2024

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