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Calcium in PDB 4cys: G6 Mutant of Pas, Arylsulfatase From Pseudomonas Aeruginosa, in Complex with Phenylphosphonic Acid

Enzymatic activity of G6 Mutant of Pas, Arylsulfatase From Pseudomonas Aeruginosa, in Complex with Phenylphosphonic Acid

All present enzymatic activity of G6 Mutant of Pas, Arylsulfatase From Pseudomonas Aeruginosa, in Complex with Phenylphosphonic Acid:
3.1.6.1;

Protein crystallography data

The structure of G6 Mutant of Pas, Arylsulfatase From Pseudomonas Aeruginosa, in Complex with Phenylphosphonic Acid, PDB code: 4cys was solved by C.M.Miton, S.Jonas, M.F.Mohammed, G.Fischer, B.V.Loo, B.Kintses, M.Hyvonen, N.Tokuriki, F.Hollfelder, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 93.25 / 1.88
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 186.965, 66.702, 89.645, 90.00, 94.04, 90.00
R / Rfree (%) 17.687 / 21.475

Calcium Binding Sites:

The binding sites of Calcium atom in the G6 Mutant of Pas, Arylsulfatase From Pseudomonas Aeruginosa, in Complex with Phenylphosphonic Acid (pdb code 4cys). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the G6 Mutant of Pas, Arylsulfatase From Pseudomonas Aeruginosa, in Complex with Phenylphosphonic Acid, PDB code: 4cys:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 4cys

Go back to Calcium Binding Sites List in 4cys
Calcium binding site 1 out of 2 in the G6 Mutant of Pas, Arylsulfatase From Pseudomonas Aeruginosa, in Complex with Phenylphosphonic Acid


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of G6 Mutant of Pas, Arylsulfatase From Pseudomonas Aeruginosa, in Complex with Phenylphosphonic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1538

b:14.2
occ:1.00
ND2 A:ASN318 2.3 7.6 1.0
OD1 A:ASP14 2.4 8.1 1.0
O A:DDZ51 2.4 8.9 1.0
OD2 A:ASP317 2.4 10.1 1.0
OD1 A:ASP13 2.4 7.1 1.0
OD1 A:ASP317 2.4 9.6 1.0
CG A:ASP317 2.7 9.2 1.0
CG A:ASN318 3.3 7.9 1.0
C A:DDZ51 3.4 9.0 1.0
CG A:ASP14 3.5 7.0 1.0
OD1 A:ASN318 3.5 9.4 1.0
CG A:ASP13 3.7 7.3 1.0
N A:ASP14 3.7 7.0 1.0
CA A:DDZ51 3.8 9.4 1.0
N A:DDZ51 4.0 9.0 1.0
OG2 A:DDZ51 4.2 9.6 1.0
C A:ASP13 4.2 6.9 1.0
CB A:ASP317 4.2 8.8 1.0
OD2 A:ASP14 4.2 6.0 1.0
CA A:ASP13 4.2 6.9 1.0
OAC A:SV71539 4.3 28.2 1.0
CA A:ASP14 4.3 7.2 1.0
CD2 A:HIS211 4.5 6.7 1.0
CB A:ASP14 4.5 7.4 1.0
NH2 A:ARG55 4.5 9.1 1.0
NZ A:LYS113 4.5 12.4 1.0
OD2 A:ASP13 4.6 7.4 1.0
CB A:ASP13 4.6 7.1 1.0
CB A:ASN318 4.6 8.0 1.0
CE A:LYS375 4.6 9.4 1.0
NZ A:LYS375 4.8 9.6 1.0
C A:ASP317 4.9 8.1 1.0
N A:ASN318 4.9 7.6 1.0
C A:ALA50 5.0 9.9 1.0
CA A:ASP317 5.0 8.0 1.0

Calcium binding site 2 out of 2 in 4cys

Go back to Calcium Binding Sites List in 4cys
Calcium binding site 2 out of 2 in the G6 Mutant of Pas, Arylsulfatase From Pseudomonas Aeruginosa, in Complex with Phenylphosphonic Acid


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of G6 Mutant of Pas, Arylsulfatase From Pseudomonas Aeruginosa, in Complex with Phenylphosphonic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca1538

b:16.1
occ:1.00
ND2 B:ASN318 2.3 7.7 1.0
O B:DDZ51 2.3 9.9 1.0
OD2 B:ASP317 2.4 8.1 1.0
OD1 B:ASP14 2.4 8.1 1.0
OD1 B:ASP13 2.4 7.3 1.0
OD1 B:ASP317 2.5 8.2 1.0
CG B:ASP317 2.8 8.5 1.0
CG B:ASN318 3.3 8.6 1.0
C B:DDZ51 3.4 10.2 1.0
CG B:ASP14 3.5 6.7 1.0
OD1 B:ASN318 3.5 9.9 1.0
CG B:ASP13 3.7 7.9 1.0
CA B:DDZ51 3.8 10.6 1.0
N B:ASP14 3.8 7.2 1.0
N B:DDZ51 4.0 10.4 1.0
OG2 B:DDZ51 4.1 10.3 1.0
OD2 B:ASP14 4.2 6.3 1.0
C B:ASP13 4.2 7.5 1.0
CB B:ASP317 4.2 8.2 1.0
CA B:ASP13 4.2 7.8 1.0
OAC B:SV71539 4.3 31.2 1.0
CA B:ASP14 4.4 7.4 1.0
NZ B:LYS113 4.4 10.2 1.0
CD2 B:HIS211 4.4 8.8 1.0
NH2 B:ARG55 4.5 10.2 1.0
CB B:ASP14 4.5 7.3 1.0
CE B:LYS375 4.5 12.1 1.0
OD2 B:ASP13 4.5 7.3 1.0
CB B:ASP13 4.6 7.7 1.0
CB B:ASN318 4.6 8.7 1.0
NZ B:LYS375 4.7 12.9 1.0
N B:ASN318 4.9 8.3 1.0
C B:ASP317 4.9 8.6 1.0
OAD B:SV71539 4.9 31.5 1.0
C B:ALA50 5.0 10.7 1.0

Reference:

C.M.Miton, S.Jonas, M.F.Mohammed, G.Fischer. Arylsulfatase From Pseudomonas Aeruginosa To Be Published.
Page generated: Sat Dec 12 04:43:02 2020

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