Calcium in PDB 4d3l: Semet Structure of A Novel Carbohydrate Binding Module From Glycoside Hydrolase Family 9 (CEL9A) From Ruminococcus Flavefaciens Fd-1 in the Orthorhombic Form

The structure of Semet Structure of A Novel Carbohydrate Binding Module From Glycoside Hydrolase Family 9 (CEL9A) From Ruminococcus Flavefaciens Fd-1 in the Orthorhombic Form, PDB code: 4d3l was solved by I.Venditto, A.Goyal, A.Thompson, L.M.A.Ferreira, C.M.G.A.Fontes, S.Najmudin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	75.02 / 2.00
Space group	I 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	102.302, 103.345, 109.067, 90.00, 90.00, 90.00
R / Rfree (%)	21.201 / 24.523

The binding sites of Calcium atom in the Semet Structure of A Novel Carbohydrate Binding Module From Glycoside Hydrolase Family 9 (CEL9A) From Ruminococcus Flavefaciens Fd-1 in the Orthorhombic Form (pdb code 4d3l). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Semet Structure of A Novel Carbohydrate Binding Module From Glycoside Hydrolase Family 9 (CEL9A) From Ruminococcus Flavefaciens Fd-1 in the Orthorhombic Form, PDB code: 4d3l:

Calcium binding site 1 out of 1 in the Semet Structure of A Novel Carbohydrate Binding Module From Glycoside Hydrolase Family 9 (CEL9A) From Ruminococcus Flavefaciens Fd-1 in the Orthorhombic Form


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Semet Structure of A Novel Carbohydrate Binding Module From Glycoside Hydrolase Family 9 (CEL9A) From Ruminococcus Flavefaciens Fd-1 in the Orthorhombic Form within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca1631 b:83.1 occ:1.00 O B:HOH2026 1.9 58.1 1.0 NZ B:LYS621 3.7 52.3 1.0 CE B:LYS621 4.3 48.5 1.0 CD B:LYS621 4.4 45.7 1.0 OE1 B:GLN536 4.8 46.9 1.0 NE2 B:GLN536 5.0 53.1 1.0

I.Venditto, A.S.Luis, M.Rydahl, J.Schuckel, V.O.Fernandes, S.Vidal-Melgosa, P.Bule, A.Goyal, V.M.R.Pires, C.G.Dourado, L.M.A.Ferreira, P.M.Coutinho, B.Henrissat, J.P.Knox, A.Basle, S.Najmudin, H.J.Gilbert, W.G.T.Willats, C.M.G.A.Fontes. Complexity of the Ruminococcus Flavefaciens Cellulosome Reflects An Expansion in Glycan Recognition. Proc.Natl.Acad.Sci.Usa V. 113 7136 2016.
ISSN: ISSN 0027-8424
PubMed: 27298375
DOI: 10.1073/PNAS.1601558113