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Calcium in PDB 4d64: Structure of Porin Omp-PST1 From P. Stuartii; the Crystallographic Symmetry Generates A Dimer of Trimers.

Protein crystallography data

The structure of Structure of Porin Omp-PST1 From P. Stuartii; the Crystallographic Symmetry Generates A Dimer of Trimers., PDB code: 4d64 was solved by C.Nasrallah, J.P.Colletier, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.25 / 3.20
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 151.520, 142.020, 113.320, 90.00, 131.00, 90.00
R / Rfree (%) 20.8 / 26.1

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of Porin Omp-PST1 From P. Stuartii; the Crystallographic Symmetry Generates A Dimer of Trimers. (pdb code 4d64). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of Porin Omp-PST1 From P. Stuartii; the Crystallographic Symmetry Generates A Dimer of Trimers., PDB code: 4d64:

Calcium binding site 1 out of 1 in 4d64

Go back to Calcium Binding Sites List in 4d64
Calcium binding site 1 out of 1 in the Structure of Porin Omp-PST1 From P. Stuartii; the Crystallographic Symmetry Generates A Dimer of Trimers.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Porin Omp-PST1 From P. Stuartii; the Crystallographic Symmetry Generates A Dimer of Trimers. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca3000

b:83.8
occ:1.00
CH2 B:TRP62 4.3 65.5 1.0
CD2 C:TRP62 4.3 56.2 1.0
CZ3 B:TRP62 4.3 65.0 1.0
CE2 C:TRP62 4.3 62.7 1.0
CZ2 B:TRP62 4.4 68.6 1.0
O C:HOH2007 4.5 26.7 1.0
CE3 B:TRP62 4.5 62.8 1.0
CE3 C:TRP62 4.6 64.7 1.0
CE2 B:TRP62 4.6 60.1 1.0
CZ2 C:TRP62 4.6 70.1 1.0
CD2 B:TRP62 4.6 55.3 1.0
CG C:TRP62 4.7 54.4 1.0
NE1 C:TRP62 4.7 62.0 1.0
CZ3 C:TRP62 4.8 68.5 1.0
CH2 C:TRP62 4.8 67.4 1.0
CD1 C:TRP62 4.9 58.5 1.0

Reference:

M.El-Khatib, C.Nasrallah, J.Lopes, Q.T.Tran, G.Tetreau, H.Basbous, D.Fenel, B.Gallet, M.Lethier, J.M.Bolla, J.M.Pages, M.Vivaudou, M.Weik, M.Winterhalter, J.P.Colletier. Porin Self-Association Enables Cell-to-Cell Contact Inprovidencia Stuartiifloating Communities. Proc. Natl. Acad. Sci. V. 115 E2220 2018U.S.A..
ISSN: ESSN 1091-6490
PubMed: 29476011
DOI: 10.1073/PNAS.1714582115
Page generated: Sat Dec 12 04:43:13 2020

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