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Calcium in PDB 4dzr: The Crystal Structure of Protein-(Glutamine-N5) Methyltransferase (Release Factor-Specific) From Alicyclobacillus Acidocaldarius Subsp. Acidocaldarius Dsm 446

Protein crystallography data

The structure of The Crystal Structure of Protein-(Glutamine-N5) Methyltransferase (Release Factor-Specific) From Alicyclobacillus Acidocaldarius Subsp. Acidocaldarius Dsm 446, PDB code: 4dzr was solved by K.Tan, G.Chhor, J.Bearden, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.88 / 2.55
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 61.766, 61.766, 122.379, 90.00, 90.00, 90.00
R / Rfree (%) 20.7 / 26.9

Calcium Binding Sites:

The binding sites of Calcium atom in the The Crystal Structure of Protein-(Glutamine-N5) Methyltransferase (Release Factor-Specific) From Alicyclobacillus Acidocaldarius Subsp. Acidocaldarius Dsm 446 (pdb code 4dzr). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the The Crystal Structure of Protein-(Glutamine-N5) Methyltransferase (Release Factor-Specific) From Alicyclobacillus Acidocaldarius Subsp. Acidocaldarius Dsm 446, PDB code: 4dzr:

Calcium binding site 1 out of 1 in 4dzr

Go back to Calcium Binding Sites List in 4dzr
Calcium binding site 1 out of 1 in the The Crystal Structure of Protein-(Glutamine-N5) Methyltransferase (Release Factor-Specific) From Alicyclobacillus Acidocaldarius Subsp. Acidocaldarius Dsm 446


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Crystal Structure of Protein-(Glutamine-N5) Methyltransferase (Release Factor-Specific) From Alicyclobacillus Acidocaldarius Subsp. Acidocaldarius Dsm 446 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca401

b:79.1
occ:1.00
O A:HOH503 2.6 57.0 1.0
OD1 A:ASN206 2.6 59.5 1.0
OE1 A:GLU262 2.6 81.6 1.0
OD1 A:ASP111 2.9 90.8 1.0
OD2 A:ASP111 3.2 99.1 1.0
CD A:GLU262 3.2 83.7 1.0
O A:PRO207 3.3 67.8 1.0
CG A:ASP111 3.4 93.8 1.0
CG A:ASN206 3.7 57.5 1.0
OE2 A:GLU262 3.9 95.5 1.0
CG A:GLU262 4.0 70.0 1.0
CA A:GLY264 4.1 84.7 1.0
ND2 A:ASN206 4.2 63.0 1.0
N A:GLY264 4.4 83.3 1.0
CB A:GLU262 4.5 49.8 1.0
C A:PRO207 4.5 64.4 1.0
C A:ASN206 4.8 53.6 1.0
CB A:ASP111 4.9 86.2 1.0
N A:PRO207 4.9 60.1 1.0
CB A:ASN206 5.0 45.7 1.0

Reference:

K.Tan, G.Chhor, J.Bearden, A.Joachimiak. The Crystal Structure of Protein-(Glutamine-N5) Methyltransferase (Release Factor-Specific) From Alicyclobacillus Acidocaldarius Subsp. Acidocaldarius Dsm 446 To Be Published.
Page generated: Sat Jul 13 23:45:04 2024

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