Calcium in PDB 4f50: Y-Family Dna Polymerase Chimera Dbh-Dbh-DPO4

All present enzymatic activity of Y-Family Dna Polymerase Chimera Dbh-Dbh-DPO4:
2.7.7.7;

The structure of Y-Family Dna Polymerase Chimera Dbh-Dbh-DPO4, PDB code: 4f50 was solved by J.D.Pata, R.C.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.47 / 2.22
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	124.482, 124.482, 70.474, 90.00, 90.00, 90.00
R / Rfree (%)	21.2 / 26.9

The binding sites of Calcium atom in the Y-Family Dna Polymerase Chimera Dbh-Dbh-DPO4 (pdb code 4f50). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Y-Family Dna Polymerase Chimera Dbh-Dbh-DPO4, PDB code: 4f50:

Calcium binding site 1 out of 1 in the Y-Family Dna Polymerase Chimera Dbh-Dbh-DPO4


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Y-Family Dna Polymerase Chimera Dbh-Dbh-DPO4 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca401 b:0.7 occ:1.00 O A:HOH553 2.9 62.8 1.0 OE2 A:GLU106 3.1 71.1 1.0 OD1 A:ASP7 3.1 78.6 1.0 OD2 A:ASP7 3.8 78.6 1.0 CG A:ASP7 3.9 71.8 1.0 O A:HOH526 4.0 54.5 1.0 CD A:GLU106 4.3 59.9 1.0 NZ A:LYS153 4.8 63.5 1.0 CG A:GLU106 5.0 51.2 1.0 CE A:LYS160 5.0 90.4 1.0

R.C.Wilson, M.A.Jackson, J.D.Pata. Y-Family Polymerase Conformation Is A Major Determinant of Fidelity and Translesion Specificity. Structure V. 21 20 2013.
ISSN: ISSN 0969-2126
PubMed: 23245850
DOI: 10.1016/J.STR.2012.11.005