Calcium in PDB 4fgo: Legionella Pneumophila Lapg (Calcium-Bound)

The structure of Legionella Pneumophila Lapg (Calcium-Bound), PDB code: 4fgo was solved by D.Chatterjee, C.D.Boyd, G.A.O'toole, H.Sondermann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.62 / 1.90
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	59.951, 59.951, 110.379, 90.00, 90.00, 90.00
R / Rfree (%)	25.9 / 26.7

The binding sites of Calcium atom in the Legionella Pneumophila Lapg (Calcium-Bound) (pdb code 4fgo). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Legionella Pneumophila Lapg (Calcium-Bound), PDB code: 4fgo:

Calcium binding site 1 out of 1 in the Legionella Pneumophila Lapg (Calcium-Bound)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Legionella Pneumophila Lapg (Calcium-Bound) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca301 b:54.0 occ:1.00 OD1 A:ASP120 2.6 44.7 1.0 O A:TYR122 2.7 49.4 1.0 OD1 A:ASP139 2.7 38.8 1.0 OD2 A:ASP139 2.8 40.1 1.0 OD2 A:ASP136 2.8 46.8 1.0 O A:HOH419 2.9 50.0 1.0 OD1 A:ASP136 2.9 44.2 1.0 CG A:ASP139 3.0 43.2 1.0 CG A:ASP136 3.2 42.4 1.0 OE1 A:GLU138 3.2 55.3 1.0 CG A:ASP120 3.5 53.6 1.0 C A:TYR122 3.6 46.1 1.0 OD2 A:ASP120 3.8 49.4 1.0 N A:TYR122 4.3 44.1 1.0 CD A:GLU138 4.3 55.4 1.0 N A:TRP123 4.4 40.8 1.0 CA A:TYR122 4.4 45.2 1.0 CA A:TRP123 4.4 45.8 1.0 N A:ASP120 4.4 46.7 1.0 N A:LYS124 4.4 41.2 1.0 CB A:ASP139 4.4 41.8 1.0 N A:ASP139 4.5 34.9 1.0 CB A:ASP136 4.6 46.4 1.0 O A:ASP120 4.6 44.5 1.0 CB A:GLU138 4.6 41.4 1.0 CG A:GLU138 4.7 44.5 1.0 C A:ASP120 4.8 47.7 1.0 CB A:ASP120 4.8 51.1 1.0 NZ A:LYS124 4.8 62.0 1.0 CB A:TYR122 4.8 50.7 1.0 N A:ASP136 4.9 49.4 1.0 CA A:ASP120 4.9 48.6 1.0 C A:TRP123 4.9 43.8 1.0 CA A:ASP139 4.9 40.2 1.0 CD1 A:TRP123 5.0 50.5 1.0

D.Chatterjee, C.D.Boyd, G.A.O'toole, H.Sondermann. Structural Characterization of A Conserved, Calcium-Dependent Periplasmic Protease From Legionella Pneumophila. J.Bacteriol. V. 194 4415 2012.
ISSN: ISSN 0021-9193
PubMed: 22707706
DOI: 10.1128/JB.00640-12