Calcium in PDB 4ihb: X-Ray Structure of the Canonical C2A Domain From Human Dysferlin

The structure of X-Ray Structure of the Canonical C2A Domain From Human Dysferlin, PDB code: 4ihb was solved by R.B.Sutton, K.L.Fuson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.90 / 2.04
Space group	I 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	102.413, 70.670, 118.310, 90.00, 113.39, 90.00
R / Rfree (%)	20 / 24

The binding sites of Calcium atom in the X-Ray Structure of the Canonical C2A Domain From Human Dysferlin (pdb code 4ihb). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the X-Ray Structure of the Canonical C2A Domain From Human Dysferlin, PDB code: 4ihb:

Calcium binding site 1 out of 1 in the X-Ray Structure of the Canonical C2A Domain From Human Dysferlin


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of X-Ray Structure of the Canonical C2A Domain From Human Dysferlin within 5.0Å range: probe atom residue distance (Å) B Occ E:Ca207 b:65.0 occ:1.00 OD1 E:ASN40 2.4 39.1 1.0 O E:HOH340 2.4 46.9 1.0 O E:ILE19 2.4 33.2 1.0 OD1 E:ASP21 2.5 34.9 1.0 OD2 E:ASP21 2.7 36.0 1.0 OD2 E:ASP18 2.8 59.0 1.0 CG E:ASP21 2.9 33.1 1.0 OD1 E:ASP18 2.9 61.9 1.0 CG E:ASP18 3.1 59.0 1.0 CG E:ASN40 3.4 41.1 1.0 C E:ILE19 3.6 32.7 1.0 N E:ILE19 4.0 48.2 1.0 ND2 E:ASN40 4.2 45.0 1.0 N E:ASN40 4.2 28.9 1.0 CA E:ASN40 4.3 31.0 1.0 CA E:ILE19 4.3 48.9 1.0 CB E:ASP21 4.3 29.3 1.0 O E:HOH345 4.3 50.4 1.0 N E:ASP21 4.3 30.0 1.0 C E:SER20 4.3 27.7 1.0 CB E:ASN40 4.4 34.6 1.0 CB E:ASP18 4.4 56.5 1.0 O E:SER20 4.5 35.0 1.0 N E:SER20 4.6 30.5 1.0 CB E:ILE19 4.6 52.1 1.0 CA E:ASP21 4.8 27.1 1.0 CA E:SER20 4.9 31.2 1.0 C E:ASP18 5.0 53.2 1.0

K.Fuson, A.Rice, R.Mahling, A.Snow, K.Nayak, P.Shanbhogue, A.G.Meyer, G.M.Redpath, A.Hinderliter, S.T.Cooper, R.B.Sutton. Alternate Splicing of Dysferlin C2A Confers Ca(2+)-Dependent and Ca(2+)-Independent Binding For Membrane Repair. Structure V. 22 104 2014.
ISSN: ISSN 0969-2126
PubMed: 24239457
DOI: 10.1016/J.STR.2013.10.001