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Calcium in PDB 4j0n: Crystal Structure of A Manganese Dependent Isatin Hydrolase

Protein crystallography data

The structure of Crystal Structure of A Manganese Dependent Isatin Hydrolase, PDB code: 4j0n was solved by K.Bjerregaard-Andersen, T.Sommer, J.K.Jensen, B.Jochimsen, M.Etzerodt, J.P.Morth, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.59 / 2.25
Space group P 32
Cell size a, b, c (Å), α, β, γ (°) 51.940, 51.940, 176.690, 90.00, 90.00, 120.00
R / Rfree (%) 17.1 / 22.3

Other elements in 4j0n:

The structure of Crystal Structure of A Manganese Dependent Isatin Hydrolase also contains other interesting chemical elements:

Manganese (Mn) 2 atoms
Sodium (Na) 3 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of A Manganese Dependent Isatin Hydrolase (pdb code 4j0n). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of A Manganese Dependent Isatin Hydrolase, PDB code: 4j0n:

Calcium binding site 1 out of 1 in 4j0n

Go back to Calcium Binding Sites List in 4j0n
Calcium binding site 1 out of 1 in the Crystal Structure of A Manganese Dependent Isatin Hydrolase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A Manganese Dependent Isatin Hydrolase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca301

b:24.6
occ:1.00
O B:HOH478 2.0 26.5 1.0
O B:HOH528 2.3 35.0 1.0
OE1 B:GLN201 2.3 25.5 1.0
O B:HOH489 2.3 29.7 1.0
O B:HOH477 2.5 22.1 1.0
CD B:GLN201 3.5 25.8 1.0
NE2 B:GLN201 4.3 24.6 1.0
O B:GLN201 4.4 33.8 1.0
CG B:GLN201 4.5 26.0 1.0
CB B:GLN201 4.5 25.6 1.0
O B:THR167 4.5 29.2 1.0
N B:GLY204 4.5 34.9 1.0
CA B:GLY204 4.6 31.8 1.0
CA B:GLN201 4.8 31.0 1.0
C B:GLN201 5.0 31.7 1.0

Reference:

K.Bjerregaard-Andersen, T.Sommer, J.K.Jensen, B.Jochimsen, M.Etzerodt, J.P.Morth. A Proton Wire and Water Channel Revealed in the Crystal Structure of Isatin Hydrolase. J.Biol.Chem. V. 289 21351 2014.
ISSN: ISSN 0021-9258
PubMed: 24917679
DOI: 10.1074/JBC.M114.568824
Page generated: Sun Jul 14 08:22:30 2024

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