Calcium in PDB 4m02: Middle Fragment(Residues 494-663) of the Binding Region of Srap

The structure of Middle Fragment(Residues 494-663) of the Binding Region of Srap, PDB code: 4m02 was solved by Y.H.Yang, Y.L.Jiang, J.Zhang, L.Wang, Y.Chen, C.Z.Zhou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.44 / 1.59
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	32.984, 46.461, 47.594, 90.00, 102.64, 90.00
R / Rfree (%)	16.4 / 20.2

The binding sites of Calcium atom in the Middle Fragment(Residues 494-663) of the Binding Region of Srap (pdb code 4m02). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Middle Fragment(Residues 494-663) of the Binding Region of Srap, PDB code: 4m02:

Calcium binding site 1 out of 1 in the Middle Fragment(Residues 494-663) of the Binding Region of Srap


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Middle Fragment(Residues 494-663) of the Binding Region of Srap within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca701 b:15.6 occ:1.00 O A:LYS575 2.3 16.8 1.0 OD2 A:ASP645 2.3 15.5 1.0 OD1 A:ASN602 2.3 15.8 1.0 OD2 A:ASP573 2.4 15.9 1.0 OD1 A:ASP601 2.4 16.2 1.0 OD2 A:ASP601 2.5 16.3 1.0 OD1 A:ASP573 2.6 15.7 1.0 CG A:ASP601 2.8 15.7 1.0 CG A:ASP573 2.8 15.6 1.0 CG A:ASN602 3.5 16.6 1.0 CG A:ASP645 3.5 14.9 1.0 C A:LYS575 3.5 17.1 1.0 CB A:ASP645 4.0 14.5 1.0 ND2 A:ASN602 4.0 17.0 1.0 N A:GLY603 4.1 15.2 1.0 ND2 A:ASN649 4.1 15.7 1.0 N A:ASN602 4.2 15.7 1.0 CB A:ASP573 4.3 15.2 1.0 CA A:LYS575 4.3 18.2 1.0 CB A:ASP601 4.3 14.9 1.0 N A:LYS575 4.3 17.3 1.0 O A:HOH801 4.4 18.0 1.0 CB A:LYS575 4.5 20.1 1.0 C A:ALA576 4.5 16.8 1.0 N A:ALA576 4.5 16.5 1.0 OD1 A:ASP645 4.5 15.9 1.0 CA A:GLY603 4.6 16.7 1.0 CA A:ALA576 4.6 17.3 1.0 CB A:ASN602 4.7 15.9 1.0 N A:PRO577 4.7 17.8 1.0 O A:ALA576 4.7 17.5 1.0 CA A:ASN602 4.8 15.6 1.0 C A:ASN602 4.8 16.0 1.0 O A:HOH856 4.9 29.4 1.0 O A:HOH855 4.9 25.1 1.0 CB A:ASN649 5.0 15.2 1.0 CA A:ASP601 5.0 15.0 1.0 CG A:ASN649 5.0 14.9 1.0

Y.H.Yang, Y.L.Jiang, J.Zhang, L.Wang, X.H.Bai, S.J.Zhang, Y.M.Ren, N.Li, Y.H.Zhang, Z.Zhang, Q.Gong, Y.Mei, T.Xue, J.R.Zhang, Y.Chen, C.Z.Zhou. Structural Insights Into Srap-Mediated Staphylococcus Aureus Adhesion to Host Cells Plos Pathog. V. 10 04169 2014.
ISSN: ISSN 1553-7366
PubMed: 24901708
DOI: 10.1371/JOURNAL.PPAT.1004169