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Calcium in PDB 4n5h: Crystal Structure of Esterase B From Lactobacillus Rhamnosis (HN001)

Protein crystallography data

The structure of Crystal Structure of Esterase B From Lactobacillus Rhamnosis (HN001), PDB code: 4n5h was solved by M.D.Bennett, R.Holland, T.S.Loo, C.A.Smith, G.E.Norris, M.-L.Delabre, B.F.Anderson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.76 / 1.71
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 109.502, 109.502, 59.433, 90.00, 90.00, 90.00
R / Rfree (%) 13.9 / 17.4

Other elements in 4n5h:

The structure of Crystal Structure of Esterase B From Lactobacillus Rhamnosis (HN001) also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Esterase B From Lactobacillus Rhamnosis (HN001) (pdb code 4n5h). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Esterase B From Lactobacillus Rhamnosis (HN001), PDB code: 4n5h:

Calcium binding site 1 out of 1 in 4n5h

Go back to Calcium Binding Sites List in 4n5h
Calcium binding site 1 out of 1 in the Crystal Structure of Esterase B From Lactobacillus Rhamnosis (HN001)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Esterase B From Lactobacillus Rhamnosis (HN001) within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Ca405

b:41.1
occ:1.00
O X:HOH773 2.4 42.8 1.0
OG1 X:THR65 2.4 24.6 1.0
O X:HOH569 2.5 25.7 1.0
O X:HOH653 2.6 34.2 1.0
O X:THR65 2.8 23.9 1.0
C X:THR65 3.4 21.4 1.0
CB X:THR65 3.6 23.1 1.0
CA X:THR65 3.8 21.5 1.0
N X:THR65 4.0 22.2 1.0
N X:MET66 4.3 15.0 1.0
CB X:ASN63 4.4 40.3 1.0
OD2 X:ASP136 4.6 24.1 1.0
O X:HOH730 4.7 44.3 1.0
O X:HOH675 4.7 36.7 1.0
CB X:ASP136 4.7 15.1 1.0
CG2 X:THR65 4.7 27.2 1.0
CA X:MET66 4.8 14.4 1.0
CG X:ASN63 4.9 46.2 1.0
CG X:ASP136 4.9 20.8 1.0

Reference:

M.D.Bennett, B.F.Anderson, G.E.Norris, M.-L.Delabre, C.A.Smith. Crystal Structure of Esterase B From Lactobacillus Rhamnosis (HN001) To Be Published.
Page generated: Sun Jul 14 10:52:48 2024

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