Atomistry » Calcium » PDB 4olk-4p2p » 4oll
Atomistry »
  Calcium »
    PDB 4olk-4p2p »
      4oll »

Calcium in PDB 4oll: Camp-Binding Acyltransferase From Mycobacterium Smegmatis

Protein crystallography data

The structure of Camp-Binding Acyltransferase From Mycobacterium Smegmatis, PDB code: 4oll was solved by M.Podobnik, K.Rebolj, S.S.Visweswariah, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 65.11 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 38.305, 82.750, 105.514, 90.00, 90.00, 90.00
R / Rfree (%) 20.6 / 26.3

Other elements in 4oll:

The structure of Camp-Binding Acyltransferase From Mycobacterium Smegmatis also contains other interesting chemical elements:

Mercury (Hg) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Camp-Binding Acyltransferase From Mycobacterium Smegmatis (pdb code 4oll). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Camp-Binding Acyltransferase From Mycobacterium Smegmatis, PDB code: 4oll:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 4oll

Go back to Calcium Binding Sites List in 4oll
Calcium binding site 1 out of 2 in the Camp-Binding Acyltransferase From Mycobacterium Smegmatis


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Camp-Binding Acyltransferase From Mycobacterium Smegmatis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca402

b:22.1
occ:0.65
CD A:ARG186 3.0 42.0 1.0
O A:HOH513 3.1 21.5 1.0
N A:ARG186 3.2 25.8 1.0
NH1 A:ARG186 3.5 40.4 1.0
CB A:ARG186 3.7 26.2 1.0
CB A:ASP92 3.7 23.3 1.0
CG A:ARG186 3.7 30.1 1.0
NE A:ARG186 3.8 35.9 1.0
CA A:ARG186 4.0 25.4 1.0
CZ A:ARG186 4.0 37.9 1.0
NH1 A:ARG112 4.0 25.1 1.0
OD2 A:ASP92 4.1 22.5 1.0
C A:VAL185 4.1 31.8 1.0
CA A:VAL185 4.2 29.4 1.0
CG A:ASP92 4.3 21.9 1.0
O A:SER184 4.4 43.8 1.0
O A:ARG186 4.5 25.6 1.0
CG1 A:VAL185 4.6 31.7 1.0
C A:ARG186 4.8 27.4 1.0
CA A:ASP92 4.9 24.9 1.0
CB A:VAL185 5.0 31.4 1.0

Calcium binding site 2 out of 2 in 4oll

Go back to Calcium Binding Sites List in 4oll
Calcium binding site 2 out of 2 in the Camp-Binding Acyltransferase From Mycobacterium Smegmatis


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Camp-Binding Acyltransferase From Mycobacterium Smegmatis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca403

b:80.8
occ:1.00
O A:HOH577 3.3 48.2 1.0
CD1 A:LEU159 4.0 32.7 1.0
CD A:ARG156 4.2 35.2 1.0
O A:HOH582 4.3 59.9 1.0
NE A:ARG156 4.3 33.9 1.0
CB A:ALA137 4.4 33.5 1.0
O A:HOH667 4.4 53.9 1.0
CG2 A:ILE140 4.4 41.9 1.0
CG A:PRO142 4.4 43.8 1.0
CD A:PRO142 4.4 41.8 1.0
CD2 A:LEU214 4.4 60.6 1.0
O A:ILE140 4.7 43.1 1.0
O A:ALA213 4.8 62.1 1.0
O A:ALA137 4.8 34.5 1.0
CB A:ILE140 4.9 39.2 1.0
CA A:ALA137 4.9 37.5 1.0

Reference:

M.Podobnik, N.Siddiqui, K.Rebolj, S.Nambi, F.Merzel, S.S.Visweswariah. Allostery and Conformational Dynamics in Camp-Binding Acyltransferases. J.Biol.Chem. V. 289 16588 2014.
ISSN: ISSN 0021-9258
PubMed: 24748621
DOI: 10.1074/JBC.M114.560086
Page generated: Sat Dec 12 05:02:23 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy