Atomistry » Calcium » PDB 4opq-4p4f » 4opz
Atomistry »
  Calcium »
    PDB 4opq-4p4f »
      4opz »

Calcium in PDB 4opz: Crystal Structure of Stabilized Tem-1 Beta-Lactamase Variant V.13 Carrying G238S Mutation in Complex with Boron-Based Inhibitor EC25

Protein crystallography data

The structure of Crystal Structure of Stabilized Tem-1 Beta-Lactamase Variant V.13 Carrying G238S Mutation in Complex with Boron-Based Inhibitor EC25, PDB code: 4opz was solved by E.Dellus-Gur, M.Elias, J.S.Fraser, D.S.Tawfik, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.17 / 1.45
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 155.560, 47.040, 34.680, 90.00, 92.46, 90.00
R / Rfree (%) 11.2 / 15.9

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Stabilized Tem-1 Beta-Lactamase Variant V.13 Carrying G238S Mutation in Complex with Boron-Based Inhibitor EC25 (pdb code 4opz). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Stabilized Tem-1 Beta-Lactamase Variant V.13 Carrying G238S Mutation in Complex with Boron-Based Inhibitor EC25, PDB code: 4opz:

Calcium binding site 1 out of 1 in 4opz

Go back to Calcium Binding Sites List in 4opz
Calcium binding site 1 out of 1 in the Crystal Structure of Stabilized Tem-1 Beta-Lactamase Variant V.13 Carrying G238S Mutation in Complex with Boron-Based Inhibitor EC25


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Stabilized Tem-1 Beta-Lactamase Variant V.13 Carrying G238S Mutation in Complex with Boron-Based Inhibitor EC25 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca302

b:9.0
occ:0.50
OE2 A:GLU36 2.3 9.0 1.0
O A:HOH405 2.3 9.6 1.0
O A:HOH404 2.5 9.2 1.0
CD A:GLU36 3.4 9.0 1.0
CG A:GLU36 4.0 9.6 1.0
NH2 A:ARG60 4.0 8.7 1.0
O A:HOH498 4.1 21.8 1.0
OD1 A:ASP37 4.3 16.2 1.0
OE1 A:GLU36 4.5 8.8 1.0
CB A:GLU36 4.6 8.7 1.0
CZ A:PHE59 4.6 11.0 1.0
O A:HOH579 4.8 13.6 1.0

Reference:

E.Dellus-Gur, M.Elias, E.Caselli, F.Prati, J.S.Fraser, D.S.Tawfik. Negative Epistasis in Enzyme Evolution the Thin Line Between Conformational Freedom and Anarchy To Be Published.
Page generated: Sun Jul 14 11:31:28 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy