Calcium in PDB 4ros: Crystal Structure of Methylobacterium Extorquens Malate Dehydrogenase Complexed with Oxaloacetate and Adenosine-5-Diphosphoribose

All present enzymatic activity of Crystal Structure of Methylobacterium Extorquens Malate Dehydrogenase Complexed with Oxaloacetate and Adenosine-5-Diphosphoribose:
1.1.1.37;

The structure of Crystal Structure of Methylobacterium Extorquens Malate Dehydrogenase Complexed with Oxaloacetate and Adenosine-5-Diphosphoribose, PDB code: 4ros was solved by J.M.Gonzalez, R.Marti-Arbona, C.J.Unkefer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.70 / 1.95
Space group	P 64 2 2
Cell size a, b, c (Å), α, β, γ (°)	108.396, 108.396, 104.014, 90.00, 90.00, 120.00
R / Rfree (%)	16.8 / 19.9

The binding sites of Calcium atom in the Crystal Structure of Methylobacterium Extorquens Malate Dehydrogenase Complexed with Oxaloacetate and Adenosine-5-Diphosphoribose (pdb code 4ros). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of Methylobacterium Extorquens Malate Dehydrogenase Complexed with Oxaloacetate and Adenosine-5-Diphosphoribose, PDB code: 4ros:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Crystal Structure of Methylobacterium Extorquens Malate Dehydrogenase Complexed with Oxaloacetate and Adenosine-5-Diphosphoribose


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Methylobacterium Extorquens Malate Dehydrogenase Complexed with Oxaloacetate and Adenosine-5-Diphosphoribose within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca401 b:36.7 occ:1.00 O A:HOH623 2.2 39.0 1.0 O A:HOH619 2.4 34.1 1.0 O A:HOH621 2.5 34.3 1.0 O A:HOH622 2.5 37.3 1.0 O A:HOH620 2.5 33.9 1.0 OE1 A:GLU287 2.5 34.1 1.0 OE2 A:GLU287 2.6 39.3 1.0 CD A:GLU287 2.9 36.1 1.0 O A:HOH608 4.4 36.0 1.0 CG A:GLU287 4.4 33.4 1.0 O A:GLY262 4.7 35.1 1.0 N A:TYR264 4.7 37.9 1.0 O A:HOH627 4.7 44.4 1.0 CA A:GLN263 5.0 33.7 1.0

Calcium binding site 2 out of 2 in the Crystal Structure of Methylobacterium Extorquens Malate Dehydrogenase Complexed with Oxaloacetate and Adenosine-5-Diphosphoribose


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of Methylobacterium Extorquens Malate Dehydrogenase Complexed with Oxaloacetate and Adenosine-5-Diphosphoribose within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca402 b:62.4 occ:1.00 O A:HOH603 2.0 44.8 1.0 O A:HOH519 2.6 49.8 1.0 OE2 A:GLU166 2.7 37.6 1.0 OE1 A:GLU166 3.3 42.1 1.0 CD A:GLU166 3.4 40.0 1.0 CG A:GLU166 4.7 37.0 1.0

J.M.Gonzalez, R.Marti-Arbona, C.J.Unkefer. Crystal Structure of Methylobacterium Extorquens Malate Dehydrogenase Complexed with Oxaloacetate and Adenosine-5-Diphosphoribose To Be Published.