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Calcium in PDB 4ufh: Mouse Galactocerebrosidase Complexed with Iso-Galacto- Fagomine Igf

Enzymatic activity of Mouse Galactocerebrosidase Complexed with Iso-Galacto- Fagomine Igf

All present enzymatic activity of Mouse Galactocerebrosidase Complexed with Iso-Galacto- Fagomine Igf:
3.2.1.46;

Protein crystallography data

The structure of Mouse Galactocerebrosidase Complexed with Iso-Galacto- Fagomine Igf, PDB code: 4ufh was solved by C.H.Hill, A.H.Viuff, S.J.Spratley, S.Salamone, S.H.Christensen, R.J.Read, N.W.Moriarty, H.H.Jensen, J.E.Deane, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.079 / 2.16
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 247.215, 247.215, 77.252, 90.00, 90.00, 120.00
R / Rfree (%) 19.04 / 21.55

Other elements in 4ufh:

The structure of Mouse Galactocerebrosidase Complexed with Iso-Galacto- Fagomine Igf also contains other interesting chemical elements:

Nickel (Ni) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Mouse Galactocerebrosidase Complexed with Iso-Galacto- Fagomine Igf (pdb code 4ufh). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Mouse Galactocerebrosidase Complexed with Iso-Galacto- Fagomine Igf, PDB code: 4ufh:

Calcium binding site 1 out of 1 in 4ufh

Go back to Calcium Binding Sites List in 4ufh
Calcium binding site 1 out of 1 in the Mouse Galactocerebrosidase Complexed with Iso-Galacto- Fagomine Igf


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Mouse Galactocerebrosidase Complexed with Iso-Galacto- Fagomine Igf within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1003

b:44.3
occ:1.00
 O A:ASP477 2.3 46.5 1.0
O A:HOH2161 2.4 45.6 1.0
O A:PHE511 2.4 45.3 1.0
OD1 A:ASN479 2.5 58.2 1.0
OD1 A:ASP660 2.5 55.7 1.0
O A:HOH2211 2.5 49.5 1.0
OD2 A:ASP660 2.5 45.8 1.0
CG A:ASP660 2.8 44.5 1.0
CG A:ASN479 3.4 52.0 1.0
C A:ASP477 3.5 46.2 1.0
C A:PHE511 3.6 44.9 1.0
ND2 A:ASN479 3.9 53.2 1.0
CA A:ASP477 4.2 47.0 1.0
CB A:ASP477 4.2 49.4 1.0
CB A:PHE511 4.3 48.2 1.0
CA A:PHE511 4.3 46.9 1.0
CB A:ASP660 4.3 42.9 1.0
N A:PHE511 4.4 48.7 1.0
OD1 A:ASN661 4.4 48.7 1.0
N A:ASN479 4.4 48.6 1.0
C A:PHE478 4.5 49.0 1.0
N A:PHE478 4.5 48.7 1.0
N A:THR512 4.6 43.0 1.0
CB A:ASN479 4.7 52.7 1.0
CB A:PHE478 4.7 45.1 1.0
CA A:ASN479 4.7 54.6 1.0
CA A:PHE478 4.8 44.9 1.0
CA A:THR512 4.8 41.2 1.0
O A:PHE478 4.9 52.2 1.0
N A:ASN661 4.9 43.8 1.0

Reference:

C.H.Hill, A.H.Viuff, S.J.Spratley, S.Salamone, S.H.Christensen, R.J.Read, N.W.Moriarty, H.H.Jensen, J.E.Deane. Azasugar Inhibitors As Pharmacological Chaperones For Krabbe Disease To Be Published.
Page generated: Sun Jul 14 13:42:42 2024

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