Calcium in PDB 4ufi: Mouse Galactocerebrosidase Complexed with Aza-Galacto- Fagomine Agf

Enzymatic activity of Mouse Galactocerebrosidase Complexed with Aza-Galacto- Fagomine Agf

All present enzymatic activity of Mouse Galactocerebrosidase Complexed with Aza-Galacto- Fagomine Agf:
3.2.1.46;

Protein crystallography data

The structure of Mouse Galactocerebrosidase Complexed with Aza-Galacto- Fagomine Agf, PDB code: 4ufi was solved by C.H.Hill, A.H.Viuff, S.J.Spratley, S.Salamone, S.H.Christensen, R.J.Read, N.W.Moriarty, H.H.Jensen, J.E.Deane, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 62.455 / 2.40
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 249.820, 249.820, 77.780, 90.00, 90.00, 120.00
R / Rfree (%) 15.88 / 20.08

Calcium Binding Sites:

The binding sites of Calcium atom in the Mouse Galactocerebrosidase Complexed with Aza-Galacto- Fagomine Agf (pdb code 4ufi). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Mouse Galactocerebrosidase Complexed with Aza-Galacto- Fagomine Agf, PDB code: 4ufi:

Calcium binding site 1 out of 1 in 4ufi

Go back to Calcium Binding Sites List in 4ufi
Calcium binding site 1 out of 1 in the Mouse Galactocerebrosidase Complexed with Aza-Galacto- Fagomine Agf


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Mouse Galactocerebrosidase Complexed with Aza-Galacto- Fagomine Agf within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca3669

b:42.1
occ:1.00
O A:PHE511 2.3 47.7 1.0
O A:ASP477 2.3 43.7 1.0
O A:HOH2156 2.4 51.2 1.0
OD1 A:ASP660 2.4 46.2 1.0
O A:HOH2154 2.4 45.7 1.0
OD1 A:ASN479 2.5 48.0 1.0
OD2 A:ASP660 2.7 42.7 1.0
CG A:ASP660 2.9 41.3 1.0
C A:PHE511 3.5 44.6 1.0
CG A:ASN479 3.5 51.1 1.0
C A:ASP477 3.5 45.0 1.0
ND2 A:ASN479 4.0 51.6 1.0
CB A:PHE511 4.2 45.4 1.0
CA A:PHE511 4.2 44.5 1.0
N A:PHE511 4.3 46.0 1.0
CB A:ASP660 4.4 39.5 1.0
CA A:ASP477 4.4 44.5 1.0
N A:ASN479 4.4 46.0 1.0
C A:PHE478 4.5 47.1 1.0
OD1 A:ASN661 4.5 46.6 1.0
N A:THR512 4.5 41.1 1.0
CB A:ASP477 4.5 47.5 1.0
CB A:PHE478 4.5 42.8 1.0
N A:PHE478 4.5 49.5 1.0
CA A:THR512 4.7 39.2 1.0
CA A:PHE478 4.7 41.5 1.0
CB A:ASN479 4.8 50.7 1.0
CA A:ASN479 4.8 52.1 1.0
O A:GLU508 4.8 58.5 1.0
O A:PHE478 4.8 47.6 1.0
CG2 A:THR512 4.8 41.1 1.0
N A:ASN661 4.9 40.5 1.0

Reference:

C.H.Hill, A.H.Viuff, S.J.Spratley, S.Salamone, S.H.Christensen, R.J.Read, N.W.Moriarty, H.H.Jensen, J.E.Deane. Azasugar Inhibitors As Pharmacological Chaperones For Krabbe Disease To Be Published.
Page generated: Sat Dec 12 05:09:12 2020

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