Calcium in PDB 4ufk: Mouse Galactocerebrosidase Complexed with Dideoxy-Imino-Lyxitol Dil

All present enzymatic activity of Mouse Galactocerebrosidase Complexed with Dideoxy-Imino-Lyxitol Dil:
3.2.1.46;

The structure of Mouse Galactocerebrosidase Complexed with Dideoxy-Imino-Lyxitol Dil, PDB code: 4ufk was solved by C.H.Hill, A.H.Viuff, S.J.Spratley, S.Salamone, S.H.Christensen, R.J.Read, N.W.Moriarty, H.H.Jensen, J.E.Deane, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	73.218 / 2.40
Space group	H 3 2
Cell size a, b, c (Å), α, β, γ (°)	248.820, 248.820, 77.850, 90.00, 90.00, 120.00
R / Rfree (%)	15.31 / 19.36

The binding sites of Calcium atom in the Mouse Galactocerebrosidase Complexed with Dideoxy-Imino-Lyxitol Dil (pdb code 4ufk). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Mouse Galactocerebrosidase Complexed with Dideoxy-Imino-Lyxitol Dil, PDB code: 4ufk:

Calcium binding site 1 out of 1 in the Mouse Galactocerebrosidase Complexed with Dideoxy-Imino-Lyxitol Dil


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Mouse Galactocerebrosidase Complexed with Dideoxy-Imino-Lyxitol Dil within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca3669 b:55.4 occ:1.00 OD1 A:ASN479 2.4 48.4 1.0 O A:PHE511 2.4 50.4 1.0 OD1 A:ASP660 2.4 46.6 1.0 O A:HOH2141 2.4 52.3 1.0 O A:ASP477 2.4 47.9 1.0 O A:HOH2139 2.6 46.0 1.0 OD2 A:ASP660 2.8 47.4 1.0 CG A:ASP660 3.0 44.3 1.0 CG A:ASN479 3.4 52.6 1.0 C A:PHE511 3.6 45.2 1.0 C A:ASP477 3.6 50.8 1.0 ND2 A:ASN479 3.8 50.5 1.0 CA A:PHE511 4.3 43.3 1.0 CB A:PHE511 4.3 44.2 1.0 OD1 A:ASN661 4.3 49.1 1.0 N A:PHE511 4.4 45.1 1.0 CA A:ASP477 4.4 50.3 1.0 CB A:ASP660 4.5 40.2 1.0 CB A:ASP477 4.5 49.3 1.0 N A:ASN479 4.5 47.6 1.0 C A:PHE478 4.6 48.8 1.0 N A:THR512 4.6 42.6 1.0 N A:PHE478 4.6 50.8 1.0 CB A:ASN479 4.7 50.5 1.0 CB A:PHE478 4.7 43.2 1.0 CA A:THR512 4.8 40.2 1.0 CA A:ASN479 4.8 49.8 1.0 O A:GLU508 4.8 61.5 1.0 CA A:PHE478 4.9 46.2 1.0 O A:PHE478 4.9 50.8 1.0 N A:ASN661 4.9 39.7 1.0 CG2 A:THR512 4.9 40.1 1.0 CG A:ASN661 5.0 48.8 1.0

C.H.Hill, A.H.Viuff, S.J.Spratley, S.Salamone, S.H.Christensen, R.J.Read, N.W.Moriarty, H.H.Jensen, J.E.Deane. Azasugar Inhibitors As Pharmacological Chaperones For Krabbe Disease To Be Published.