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Calcium in PDB 4uno: Crystal Structure of the Ets Domain of Human ETV5 in Complex with Dna

Protein crystallography data

The structure of Crystal Structure of the Ets Domain of Human ETV5 in Complex with Dna, PDB code: 4uno was solved by J.A.Newman, H.Aitkenhead, C.D.O.Cooper, D.M.Pinkas, L.Shrestha, N.Burgess-Brown, J.Kopec, F.Fitzpatrick, C.Tallant, F.Von Delft, C.H.Arrowsmith, C.Bountra, A.Edwards, O.Gileadi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.515 / 1.95
Space group P 32 1 2
Cell size a, b, c (Å), α, β, γ (°) 58.022, 58.022, 84.711, 90.00, 90.00, 120.00
R / Rfree (%) 17.29 / 20.31

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Ets Domain of Human ETV5 in Complex with Dna (pdb code 4uno). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of the Ets Domain of Human ETV5 in Complex with Dna, PDB code: 4uno:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 4uno

Go back to Calcium Binding Sites List in 4uno
Calcium binding site 1 out of 2 in the Crystal Structure of the Ets Domain of Human ETV5 in Complex with Dna


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Ets Domain of Human ETV5 in Complex with Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1462

b:65.3
occ:1.00
O A:GLY440 2.4 41.4 1.0
O A:HOH2061 2.5 40.2 1.0
O A:HOH2062 2.9 47.4 1.0
C A:GLY440 3.6 42.0 1.0
CA A:GLY440 4.4 37.9 1.0
N A:GLU441 4.5 37.1 1.0
CA A:GLU441 4.6 38.3 1.0
O A:HOH2063 4.7 36.6 1.0
N A:ARG442 4.8 32.3 1.0

Calcium binding site 2 out of 2 in 4uno

Go back to Calcium Binding Sites List in 4uno
Calcium binding site 2 out of 2 in the Crystal Structure of the Ets Domain of Human ETV5 in Complex with Dna


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of the Ets Domain of Human ETV5 in Complex with Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1463

b:48.8
occ:1.00
O A:HOH2077 2.3 43.4 1.0
O A:HOH2072 2.3 50.3 1.0
OD2 A:ASP452 2.4 43.3 1.0
OD1 A:ASP452 2.5 37.0 1.0
O A:HOH2075 2.8 53.2 1.0
CG A:ASP452 2.8 40.1 1.0
O A:HOH2074 3.0 44.4 1.0
O A:HOH2070 3.0 41.0 1.0
O A:HOH2071 3.0 48.6 1.0
CB A:ASP452 4.3 33.5 1.0
O A:HOH2068 4.7 38.4 1.0

Reference:

J.A.Newman, H.Aitkenhead, C.D.O.Cooper, D.M.Pinkas, L.Shrestha, N.Burgess-Brown, J.Kopec, F.Fitzpatrick, C.Tallant, F.Von Delft, C.H.Arrowsmith, C.Bountra, A.Edwards, O.Gileadi. Rystal Structure of the Ets Domain of Human ETV5 in Complex with Dna To Be Published.
Page generated: Sun Jul 14 13:45:53 2024

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