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Calcium in PDB 4wdr: Crystal Structure of Haloalkane Dehalogenase Linb 140A+143L+177W+211L Mutant (LINB86) From Sphingobium Japonicum UT26

Enzymatic activity of Crystal Structure of Haloalkane Dehalogenase Linb 140A+143L+177W+211L Mutant (LINB86) From Sphingobium Japonicum UT26

All present enzymatic activity of Crystal Structure of Haloalkane Dehalogenase Linb 140A+143L+177W+211L Mutant (LINB86) From Sphingobium Japonicum UT26:
3.8.1.5;

Protein crystallography data

The structure of Crystal Structure of Haloalkane Dehalogenase Linb 140A+143L+177W+211L Mutant (LINB86) From Sphingobium Japonicum UT26, PDB code: 4wdr was solved by O.Degtjarik, P.Rezacova, I.Iermak, R.Chaloupkova, J.Damborsky, I.Kuta-Smatanova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.58 / 2.50
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 125.937, 125.937, 213.818, 90.00, 90.00, 120.00
R / Rfree (%) 16.5 / 19.6

Other elements in 4wdr:

The structure of Crystal Structure of Haloalkane Dehalogenase Linb 140A+143L+177W+211L Mutant (LINB86) From Sphingobium Japonicum UT26 also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Haloalkane Dehalogenase Linb 140A+143L+177W+211L Mutant (LINB86) From Sphingobium Japonicum UT26 (pdb code 4wdr). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Haloalkane Dehalogenase Linb 140A+143L+177W+211L Mutant (LINB86) From Sphingobium Japonicum UT26, PDB code: 4wdr:

Calcium binding site 1 out of 1 in 4wdr

Go back to Calcium Binding Sites List in 4wdr
Calcium binding site 1 out of 1 in the Crystal Structure of Haloalkane Dehalogenase Linb 140A+143L+177W+211L Mutant (LINB86) From Sphingobium Japonicum UT26


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Haloalkane Dehalogenase Linb 140A+143L+177W+211L Mutant (LINB86) From Sphingobium Japonicum UT26 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca302

b:83.4
occ:0.33
OD1 A:ASP73 2.5 90.5 1.0
CG A:ASP73 3.6 83.0 1.0
OD2 A:ASP73 3.9 91.3 1.0
CB A:ASP73 4.9 69.1 1.0

Reference:

O.Degtjarik, P.Rezacova, R.Chaloupkova, J.Damborsky, I.Kuta-Smatanova. Crystal Structure of Haloalkane Dehalogenase Linb Mutant (L177W) From Sphingobium Japonicum UT26 Acs Catalysis 2016.
ISSN: ESSN 2155-5435
DOI: 10.1021/ACSCATAL.6B02081
Page generated: Sun Jul 14 14:04:03 2024

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