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Calcium in PDB 4wi0: Crystal Structure of COH3SCAB-XDOC_M2SCAA Complex: A C-Terminal Interface Mutant of Type II Cohesin-X-Dockerin Complex From Acetivibrio Cellulolyticus

Protein crystallography data

The structure of Crystal Structure of COH3SCAB-XDOC_M2SCAA Complex: A C-Terminal Interface Mutant of Type II Cohesin-X-Dockerin Complex From Acetivibrio Cellulolyticus, PDB code: 4wi0 was solved by V.D.Alves, K.Cameron, S.H.Najmudin, C.M.G.A.Fontes, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 63.71 / 1.93
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 38.540, 88.300, 92.020, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 24.1

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of COH3SCAB-XDOC_M2SCAA Complex: A C-Terminal Interface Mutant of Type II Cohesin-X-Dockerin Complex From Acetivibrio Cellulolyticus (pdb code 4wi0). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of COH3SCAB-XDOC_M2SCAA Complex: A C-Terminal Interface Mutant of Type II Cohesin-X-Dockerin Complex From Acetivibrio Cellulolyticus, PDB code: 4wi0:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 4wi0

Go back to Calcium Binding Sites List in 4wi0
Calcium binding site 1 out of 2 in the Crystal Structure of COH3SCAB-XDOC_M2SCAA Complex: A C-Terminal Interface Mutant of Type II Cohesin-X-Dockerin Complex From Acetivibrio Cellulolyticus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of COH3SCAB-XDOC_M2SCAA Complex: A C-Terminal Interface Mutant of Type II Cohesin-X-Dockerin Complex From Acetivibrio Cellulolyticus within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca201

b:19.6
occ:1.00
O B:ALA131 2.3 20.8 1.0
OD1 B:ASP121 2.3 20.5 1.0
OD1 B:ASP129 2.4 23.2 1.0
O B:HOH340 2.4 22.9 1.0
O B:HOH341 2.4 22.6 1.0
OD2 B:ASP136 2.5 19.4 1.0
OD1 B:ASP136 2.5 19.4 1.0
CG B:ASP136 2.9 19.3 1.0
CG B:ASP129 3.3 25.2 1.0
C B:ALA131 3.5 20.6 1.0
CG B:ASP121 3.5 20.2 1.0
OD2 B:ASP129 3.7 26.8 1.0
CA B:ASP121 3.9 18.7 1.0
N B:MET122 4.1 20.0 1.0
N B:ALA131 4.1 21.6 1.0
CB B:ASP121 4.2 18.8 1.0
CA B:ALA131 4.3 21.6 1.0
C B:ASP121 4.3 19.2 1.0
CB B:ASP136 4.4 19.1 1.0
OD2 B:ASP121 4.4 20.6 1.0
N B:ASP129 4.4 24.9 1.0
N B:ILE132 4.4 20.1 1.0
OD1 B:ASN133 4.4 23.8 1.0
CA B:ILE132 4.5 20.0 1.0
O B:MET122 4.5 22.7 1.0
CB B:ASP129 4.6 26.0 1.0
O B:HOH357 4.7 36.4 1.0
CB B:ALA131 4.7 22.9 1.0
O B:GLY120 4.8 17.1 1.0
N B:ASN133 4.8 21.4 1.0
N B:GLY130 4.8 22.7 1.0
CA B:ASP129 4.9 25.2 1.0
CG B:ASN133 4.9 24.1 1.0

Calcium binding site 2 out of 2 in 4wi0

Go back to Calcium Binding Sites List in 4wi0
Calcium binding site 2 out of 2 in the Crystal Structure of COH3SCAB-XDOC_M2SCAA Complex: A C-Terminal Interface Mutant of Type II Cohesin-X-Dockerin Complex From Acetivibrio Cellulolyticus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of COH3SCAB-XDOC_M2SCAA Complex: A C-Terminal Interface Mutant of Type II Cohesin-X-Dockerin Complex From Acetivibrio Cellulolyticus within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca202

b:19.9
occ:1.00
OD1 B:ASN160 2.3 19.5 1.0
O B:ALA164 2.4 20.3 1.0
OD1 B:ASP158 2.4 19.6 1.0
OD1 B:ASP162 2.4 19.8 1.0
O B:HOH338 2.4 20.0 1.0
OD1 B:ASP169 2.4 15.7 1.0
OD2 B:ASP169 2.6 16.7 1.0
CG B:ASP169 2.8 16.1 1.0
CG B:ASP162 3.3 21.5 1.0
CG B:ASN160 3.4 19.1 1.0
CG B:ASP158 3.4 19.9 1.0
C B:ALA164 3.5 20.1 1.0
OD2 B:ASP162 3.7 21.6 1.0
ND2 B:ASN160 3.9 19.1 1.0
OD2 B:ASP158 4.1 20.1 1.0
N B:ASP162 4.2 22.0 1.0
CA B:ASP158 4.2 18.7 1.0
N B:ALA164 4.3 21.4 1.0
CB B:ASP158 4.3 19.4 1.0
N B:ASN160 4.3 18.0 1.0
CB B:ASP169 4.3 15.8 1.0
N B:ILE165 4.4 20.1 1.0
CA B:ALA164 4.4 21.2 1.0
CA B:ILE165 4.4 19.4 1.0
C B:ASP158 4.5 18.1 1.0
CB B:ASP162 4.5 22.5 1.0
N B:ARG161 4.5 20.7 1.0
N B:LEU159 4.6 17.7 1.0
OG B:SER166 4.6 19.6 1.0
CB B:ASN160 4.6 18.8 1.0
N B:SER166 4.7 18.8 1.0
CA B:ASN160 4.7 18.7 1.0
CA B:ASP162 4.7 22.7 1.0
C B:ASN160 4.8 19.7 1.0
CB B:ALA164 4.8 21.6 1.0
N B:ASP169 4.9 16.7 1.0
N B:GLY163 4.9 22.4 1.0

Reference:

V.D.Alves, K.Cameron, S.H.Najmudin, C.M.G.A.Fontes. Crystal Structure of COH3SCAB-XDOC_M1SCAA Complex: A C-Terminal Interface Mutant of Type II Cohesin-X-Dockerin Complex From Acetivibrio Cellulolyticus To Be Published.
Page generated: Sat Dec 12 05:10:41 2020

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