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Calcium in PDB 4x6u: Crystal Structure of Lipase From Geobacillus Stearothermophilus T6

Enzymatic activity of Crystal Structure of Lipase From Geobacillus Stearothermophilus T6

All present enzymatic activity of Crystal Structure of Lipase From Geobacillus Stearothermophilus T6:
3.1.1.3;

Protein crystallography data

The structure of Crystal Structure of Lipase From Geobacillus Stearothermophilus T6, PDB code: 4x6u was solved by M.Kanteev, A.Dror, S.Gihaz, A.Fishman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.99 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 49.979, 71.570, 113.332, 90.00, 90.00, 90.00
R / Rfree (%) 19.1 / 22.9

Other elements in 4x6u:

The structure of Crystal Structure of Lipase From Geobacillus Stearothermophilus T6 also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Lipase From Geobacillus Stearothermophilus T6 (pdb code 4x6u). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Lipase From Geobacillus Stearothermophilus T6, PDB code: 4x6u:

Calcium binding site 1 out of 1 in 4x6u

Go back to Calcium Binding Sites List in 4x6u
Calcium binding site 1 out of 1 in the Crystal Structure of Lipase From Geobacillus Stearothermophilus T6


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Lipase From Geobacillus Stearothermophilus T6 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca402

b:46.4
occ:1.00
 O A:GLY287 2.1 29.6 1.0
OE2 A:GLU361 2.3 21.8 1.0
OD2 A:ASP366 2.5 30.3 1.0
O A:PRO367 2.5 24.6 1.0
C A:GLY287 3.2 29.5 1.0
CD A:GLU361 3.3 22.8 1.0
CG A:GLU361 3.6 25.2 1.0
CG A:ASP366 3.7 28.1 1.0
C A:PRO367 3.7 28.2 1.0
CA A:GLY287 3.9 29.3 1.0
NH2 A:ARG272 4.1 28.7 1.0
N A:MET288 4.2 30.1 1.0
N A:ASN289 4.4 26.4 1.0
C A:MET288 4.4 29.7 1.0
CB A:ASN368 4.5 23.2 1.0
OE1 A:GLU361 4.5 19.3 1.0
CA A:MET288 4.5 30.9 1.0
OD1 A:ASP366 4.5 32.2 1.0
N A:ASN368 4.6 22.9 1.0
N A:PRO367 4.6 25.0 1.0
CB A:ASP366 4.6 26.1 1.0
CA A:ASN368 4.6 28.2 1.0
CA A:PRO367 4.7 24.2 1.0
OD2 A:ASP358 4.7 29.8 1.0
C A:ASP366 4.8 22.7 1.0
O A:MET288 4.9 27.1 1.0
CG A:PRO367 5.0 31.8 1.0
CD A:PRO367 5.0 21.7 1.0

Reference:

A.Dror, M.Kanteev, I.Kagan, S.Gihaz, A.Shahar, A.Fishman. Structural Insights Into Methanol-Stable Variants of Lipase T6 From Geobacillus Stearothermophilus. Appl.Microbiol.Biotechnol. V. 99 9449 2015.
ISSN: ESSN 1432-0614
PubMed: 26026940
DOI: 10.1007/S00253-015-6700-4
Page generated: Sun Jul 14 14:28:22 2024

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