Calcium in PDB 4zgf: Crystal Structure of A DUF4847 Family Protein (BVU_2626) From Bacteroides Vulgatus Atcc 8482 at 1.00 A Resolution

The structure of Crystal Structure of A DUF4847 Family Protein (BVU_2626) From Bacteroides Vulgatus Atcc 8482 at 1.00 A Resolution, PDB code: 4zgf was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.30 / 1.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	31.747, 55.486, 76.176, 90.00, 90.00, 90.00
R / Rfree (%)	11.6 / 13.7

The binding sites of Calcium atom in the Crystal Structure of A DUF4847 Family Protein (BVU_2626) From Bacteroides Vulgatus Atcc 8482 at 1.00 A Resolution (pdb code 4zgf). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 3 binding sites of Calcium where determined in the Crystal Structure of A DUF4847 Family Protein (BVU_2626) From Bacteroides Vulgatus Atcc 8482 at 1.00 A Resolution, PDB code: 4zgf:
Jump to Calcium binding site number: 1; 2; 3;

Calcium binding site 1 out of 3 in the Crystal Structure of A DUF4847 Family Protein (BVU_2626) From Bacteroides Vulgatus Atcc 8482 at 1.00 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A DUF4847 Family Protein (BVU_2626) From Bacteroides Vulgatus Atcc 8482 at 1.00 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca201 b:6.9 occ:1.00 O A:HOH353 2.4 10.4 0.5 OD2 A:ASP164 2.4 8.3 1.0 OD1 A:ASP164 2.5 6.8 1.0 O A:HOH412 2.7 5.5 0.5 CG A:ASP164 2.9 7.1 1.0 CA A:CA202 3.8 5.7 1.0 O A:HOH412 4.0 9.9 0.5 CB A:ASP164 4.4 7.3 1.0 O A:HOH353 4.4 6.3 0.5 O A:HOH441 4.4 15.2 0.5 O A:HOH321 4.5 17.0 0.5 O A:HOH460 4.9 6.4 1.0

Calcium binding site 2 out of 3 in the Crystal Structure of A DUF4847 Family Protein (BVU_2626) From Bacteroides Vulgatus Atcc 8482 at 1.00 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of A DUF4847 Family Protein (BVU_2626) From Bacteroides Vulgatus Atcc 8482 at 1.00 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca202 b:5.7 occ:1.00 OD1 A:ASP164 2.4 6.8 1.0 O A:HOH460 2.4 6.4 1.0 O A:ASP164 2.5 6.9 1.0 C A:ASP164 3.3 7.5 1.0 CG A:ASP164 3.7 7.1 1.0 CA A:CA201 3.8 6.9 1.0 N A:ASP164 4.0 6.3 1.0 CA A:ASP164 4.1 6.8 1.0 O A:HOH423 4.1 8.9 0.7 OXT A:ASP164 4.1 9.0 1.0 CB A:ASP164 4.4 7.3 1.0 O A:HOH412 4.5 5.5 0.5 O A:HOH431 4.5 14.8 1.0 OD2 A:ASP164 4.6 8.3 1.0 O A:HOH423 4.6 7.4 0.3 O A:HOH412 4.9 9.9 0.5

Calcium binding site 3 out of 3 in the Crystal Structure of A DUF4847 Family Protein (BVU_2626) From Bacteroides Vulgatus Atcc 8482 at 1.00 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Crystal Structure of A DUF4847 Family Protein (BVU_2626) From Bacteroides Vulgatus Atcc 8482 at 1.00 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca203 b:15.9 occ:0.30 O A:HOH307 2.0 38.2 1.0 OD2 A:ASP105 2.2 17.3 1.0 O A:HOH403 2.2 41.8 1.0 O A:HOH413 2.2 36.7 1.0 OD2 A:ASP108 2.5 19.8 1.0 CG A:ASP105 3.3 13.9 1.0 CG A:ASP108 3.3 13.8 1.0 OD1 A:ASP108 3.5 12.6 1.0 CB A:ASP105 3.9 11.0 1.0 O A:HOH492 3.9 32.9 1.0 OD1 A:ASP105 4.2 16.0 1.0 OG1 A:THR110 4.3 8.8 1.0 O A:HOH305 4.3 39.0 1.0 CB A:ASP108 4.6 12.2 1.0 NZ A:LYS107 4.8 19.9 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.