Calcium in PDB 4zh8: Factor Xa Complex with GTC000006

Enzymatic activity of Factor Xa Complex with GTC000006

All present enzymatic activity of Factor Xa Complex with GTC000006:
3.4.21.6;

Protein crystallography data

The structure of Factor Xa Complex with GTC000006, PDB code: 4zh8 was solved by M.A.Convery, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 56.663, 72.781, 80.454, 90.00, 90.00, 90.00
R / Rfree (%) 20.7 / 25.5

Other elements in 4zh8:

The structure of Factor Xa Complex with GTC000006 also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Factor Xa Complex with GTC000006 (pdb code 4zh8). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Factor Xa Complex with GTC000006, PDB code: 4zh8:

Calcium binding site 1 out of 1 in 4zh8

Go back to Calcium Binding Sites List in 4zh8
Calcium binding site 1 out of 1 in the Factor Xa Complex with GTC000006


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Factor Xa Complex with GTC000006 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca301

b:27.1
occ:1.00
O A:ASN72 2.2 29.6 1.0
OE1 A:GLU77 2.2 35.7 1.0
O A:GLN75 2.3 42.1 1.0
O A:HOH557 2.3 47.4 1.0
OD1 A:ASP70 2.4 24.7 1.0
OE1 A:GLU80 2.4 27.3 1.0
CD A:GLU77 3.3 40.5 1.0
C A:ASN72 3.3 29.7 1.0
C A:GLN75 3.5 42.6 1.0
CD A:GLU80 3.5 27.3 1.0
CG A:GLU77 3.6 40.3 1.0
CG A:ASP70 3.6 26.5 1.0
N A:ASN72 3.9 26.6 1.0
CG A:GLU80 4.0 24.5 1.0
O A:HOH410 4.0 31.6 1.0
CA A:ASN72 4.1 27.9 1.0
OD2 A:ASP70 4.2 26.6 1.0
N A:GLU77 4.2 40.0 1.0
N A:THR73 4.3 31.8 1.0
N A:GLN75 4.3 41.7 1.0
CB A:ASN72 4.3 28.2 1.0
N A:GLU76 4.4 42.2 1.0
CA A:GLU76 4.4 42.3 1.0
OE2 A:GLU77 4.4 42.7 1.0
CB A:GLU77 4.5 39.0 1.0
CA A:THR73 4.5 34.9 1.0
CA A:GLN75 4.5 42.9 1.0
OE2 A:GLU80 4.6 27.8 1.0
N A:ARG71 4.7 24.5 1.0
C A:GLU76 4.7 41.4 1.0
O A:HOH577 4.7 46.3 1.0
CB A:ASP70 4.8 23.2 1.0
C A:THR73 4.8 37.0 1.0
CA A:ASP70 4.9 23.3 1.0
CA A:GLU77 5.0 39.1 1.0
N A:GLU74 5.0 38.4 1.0

Reference:

M.A.Convery, M.A.Convery. N/A N/A.
Page generated: Sat Dec 12 05:15:37 2020

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