Atomistry » Calcium » PDB 5b4y-5bx5 » 5b5l
Atomistry »
  Calcium »
    PDB 5b4y-5bx5 »
      5b5l »

Calcium in PDB 5b5l: Crystal Structure of Acetyl Esterase Mutant S10A with Acetate Ion

Protein crystallography data

The structure of Crystal Structure of Acetyl Esterase Mutant S10A with Acetate Ion, PDB code: 5b5l was solved by K.Uechi, S.Kamachi, H.Akita, S.Mine, M.Watanabe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.40
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 64.589, 64.589, 89.644, 90.00, 90.00, 120.00
R / Rfree (%) 12.1 / 17.4

Other elements in 5b5l:

The structure of Crystal Structure of Acetyl Esterase Mutant S10A with Acetate Ion also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Acetyl Esterase Mutant S10A with Acetate Ion (pdb code 5b5l). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Acetyl Esterase Mutant S10A with Acetate Ion, PDB code: 5b5l:

Calcium binding site 1 out of 1 in 5b5l

Go back to Calcium Binding Sites List in 5b5l
Calcium binding site 1 out of 1 in the Crystal Structure of Acetyl Esterase Mutant S10A with Acetate Ion


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Acetyl Esterase Mutant S10A with Acetate Ion within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca302

b:12.2
occ:1.00
O A:PHE36 2.2 12.9 1.0
OD1 A:ASP35 2.2 19.6 1.0
OD2 A:ASP54 2.2 19.8 1.0
O A:HOH558 2.3 18.4 1.0
O A:HOH520 2.3 21.1 1.0
OD2 A:ASP56 2.3 14.5 1.0
CG A:ASP54 2.9 13.9 1.0
OD1 A:ASP54 2.9 15.7 1.0
C A:PHE36 3.3 13.0 1.0
CG A:ASP56 3.3 13.8 1.0
CG A:ASP35 3.3 20.6 1.0
N A:PHE36 3.7 13.1 1.0
CB A:ASP56 3.8 12.5 1.0
OD2 A:ASP35 3.9 23.5 1.0
O A:HOH516 3.9 15.4 1.0
CA A:PHE36 4.0 11.9 1.0
C A:ASP35 4.3 14.7 1.0
O A:HOH561 4.3 20.8 1.0
OD1 A:ASP56 4.4 13.2 1.0
CB A:ASP54 4.4 15.5 1.0
N A:VAL37 4.4 14.3 1.0
ZN A:ZN303 4.4 15.7 1.0
CB A:ASP35 4.4 16.2 1.0
CA A:ASP35 4.4 14.8 1.0
O A:HOH549 4.5 27.6 1.0
CB A:PHE36 4.6 11.7 1.0
CA A:VAL37 4.6 14.2 1.0
CG1 A:VAL37 4.8 15.1 1.0
O A:HOH591 4.8 37.5 1.0

Reference:

K.Uechi, S.Kamachi, H.Akita, S.Mine, M.Watanabe. Crystal Structure of Acetyl Esterase Mutant S10A with Acetate Ion To Be Published.
Page generated: Sun Jul 14 16:49:57 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy