Calcium in PDB 5b7x: uc(Nmr) Solution Structure of An Ef-Hand Calcium Binding Protein (EHCABP6) From Entamoeba Histolytica
Calcium Binding Sites:
The binding sites of Calcium atom in the uc(Nmr) Solution Structure of An Ef-Hand Calcium Binding Protein (EHCABP6) From Entamoeba Histolytica
(pdb code 5b7x). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the
uc(Nmr) Solution Structure of An Ef-Hand Calcium Binding Protein (EHCABP6) From Entamoeba Histolytica, PDB code: 5b7x:
Jump to Calcium binding site number:
1;
2;
Calcium binding site 1 out
of 2 in 5b7x
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Calcium Binding Sites List in 5b7x
Calcium binding site 1 out
of 2 in the uc(Nmr) Solution Structure of An Ef-Hand Calcium Binding Protein (EHCABP6) From Entamoeba Histolytica
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of uc(Nmr) Solution Structure of An Ef-Hand Calcium Binding Protein (EHCABP6) From Entamoeba Histolytica within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca201
b:35.3
occ:1.00
|
HE22
|
A:GLN34
|
2.1
|
64.0
|
1.0
|
HA
|
A:ASP23
|
2.4
|
0.5
|
1.0
|
OD2
|
A:ASP27
|
2.5
|
21.1
|
1.0
|
OE1
|
A:GLN34
|
2.6
|
24.4
|
1.0
|
OD2
|
A:ASP25
|
2.7
|
14.2
|
1.0
|
OD1
|
A:ASP25
|
2.8
|
15.6
|
1.0
|
NE2
|
A:GLN34
|
2.9
|
5.2
|
1.0
|
CG
|
A:ASP23
|
3.0
|
13.3
|
1.0
|
CG
|
A:ASP27
|
3.0
|
10.2
|
1.0
|
OD1
|
A:ASP27
|
3.0
|
31.2
|
1.0
|
O
|
A:LYS29
|
3.0
|
23.1
|
1.0
|
OD2
|
A:ASP23
|
3.0
|
64.4
|
1.0
|
OD1
|
A:ASP23
|
3.1
|
35.3
|
1.0
|
CD
|
A:GLN34
|
3.1
|
55.1
|
1.0
|
CG
|
A:ASP25
|
3.1
|
33.1
|
1.0
|
CA
|
A:ASP23
|
3.4
|
72.5
|
1.0
|
CB
|
A:ASP23
|
3.7
|
14.4
|
1.0
|
H
|
A:ASP27
|
3.7
|
2.2
|
1.0
|
HE21
|
A:GLN34
|
3.8
|
2.2
|
1.0
|
HD2
|
A:TYR22
|
3.8
|
34.4
|
1.0
|
HE2
|
A:TYR22
|
3.9
|
75.2
|
1.0
|
HA
|
A:ILE30
|
3.9
|
13.4
|
1.0
|
HG12
|
A:ILE30
|
4.0
|
2.5
|
1.0
|
O
|
A:ASP23
|
4.1
|
60.0
|
1.0
|
C
|
A:ASP23
|
4.1
|
73.5
|
1.0
|
O
|
A:TYR22
|
4.2
|
4.2
|
1.0
|
C
|
A:LYS29
|
4.3
|
70.3
|
1.0
|
HB2
|
A:ASP23
|
4.3
|
1.4
|
1.0
|
CB
|
A:ASP27
|
4.3
|
63.2
|
1.0
|
N
|
A:ASP23
|
4.4
|
4.3
|
1.0
|
H
|
A:GLY28
|
4.4
|
2.1
|
1.0
|
HB3
|
A:ASP27
|
4.4
|
11.4
|
1.0
|
H
|
A:TYR26
|
4.4
|
20.1
|
1.0
|
H
|
A:LYS29
|
4.4
|
51.4
|
1.0
|
CD2
|
A:TYR22
|
4.5
|
43.1
|
1.0
|
CE2
|
A:TYR22
|
4.5
|
63.2
|
1.0
|
HB3
|
A:ASP23
|
4.6
|
63.4
|
1.0
|
CG
|
A:GLN34
|
4.6
|
53.5
|
1.0
|
N
|
A:ASP27
|
4.6
|
43.5
|
1.0
|
CB
|
A:ASP25
|
4.6
|
71.0
|
1.0
|
C
|
A:TYR22
|
4.7
|
13.2
|
1.0
|
H
|
A:ASP25
|
4.7
|
32.0
|
1.0
|
HG21
|
A:ILE30
|
4.8
|
21.4
|
1.0
|
CA
|
A:ILE30
|
4.9
|
24.3
|
1.0
|
N
|
A:LYS29
|
5.0
|
24.0
|
1.0
|
HG3
|
A:LYS29
|
5.0
|
4.2
|
1.0
|
HG2
|
A:GLN34
|
5.0
|
20.2
|
1.0
|
CG1
|
A:ILE30
|
5.0
|
50.3
|
1.0
|
HD2
|
A:LYS29
|
5.0
|
42.3
|
1.0
|
|
Calcium binding site 2 out
of 2 in 5b7x
Go back to
Calcium Binding Sites List in 5b7x
Calcium binding site 2 out
of 2 in the uc(Nmr) Solution Structure of An Ef-Hand Calcium Binding Protein (EHCABP6) From Entamoeba Histolytica
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of uc(Nmr) Solution Structure of An Ef-Hand Calcium Binding Protein (EHCABP6) From Entamoeba Histolytica within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca202
b:62.4
occ:1.00
|
HG22
|
A:ILE103
|
2.0
|
75.1
|
1.0
|
OD2
|
A:ASP98
|
2.1
|
65.4
|
1.0
|
HG21
|
A:ILE103
|
2.4
|
31.2
|
1.0
|
CG2
|
A:ILE103
|
2.5
|
41.3
|
1.0
|
HA
|
A:LYS99
|
2.6
|
22.2
|
1.0
|
HG23
|
A:ILE103
|
2.8
|
63.2
|
1.0
|
CG
|
A:ASP98
|
2.9
|
34.4
|
1.0
|
OD1
|
A:ASP96
|
3.0
|
12.5
|
1.0
|
N
|
A:LYS99
|
3.4
|
70.3
|
1.0
|
C
|
A:ASP98
|
3.4
|
1.2
|
1.0
|
OD1
|
A:ASP98
|
3.4
|
61.1
|
1.0
|
O
|
A:ASP98
|
3.5
|
31.1
|
1.0
|
CA
|
A:LYS99
|
3.5
|
41.3
|
1.0
|
H
|
A:ASP100
|
3.7
|
50.2
|
1.0
|
HB3
|
A:ASP98
|
3.8
|
71.4
|
1.0
|
CB
|
A:ASP98
|
3.8
|
74.2
|
1.0
|
CG
|
A:ASP96
|
3.8
|
60.2
|
1.0
|
OD2
|
A:ASP96
|
3.9
|
0.0
|
1.0
|
H
|
A:LYS99
|
3.9
|
43.5
|
1.0
|
CB
|
A:ILE103
|
3.9
|
41.2
|
1.0
|
OD2
|
A:ASP100
|
3.9
|
53.5
|
1.0
|
HB
|
A:ILE103
|
4.1
|
60.0
|
1.0
|
CG
|
A:ASP107
|
4.1
|
5.5
|
1.0
|
OD1
|
A:ASP107
|
4.2
|
54.5
|
1.0
|
OD2
|
A:ASP107
|
4.2
|
4.3
|
1.0
|
HB3
|
A:ASP107
|
4.2
|
63.0
|
1.0
|
O
|
A:LYS102
|
4.3
|
33.0
|
1.0
|
CA
|
A:ASP98
|
4.3
|
25.3
|
1.0
|
N
|
A:ASP100
|
4.3
|
4.1
|
1.0
|
HA
|
A:ILE103
|
4.3
|
54.4
|
1.0
|
C
|
A:LYS99
|
4.3
|
0.0
|
1.0
|
HB2
|
A:LYS99
|
4.4
|
53.1
|
1.0
|
OD1
|
A:ASP100
|
4.4
|
43.3
|
1.0
|
CG
|
A:ASP100
|
4.4
|
55.2
|
1.0
|
CB
|
A:LYS99
|
4.5
|
5.1
|
1.0
|
HD11
|
A:ILE103
|
4.6
|
11.3
|
1.0
|
CB
|
A:ASP107
|
4.6
|
10.1
|
1.0
|
HD12
|
A:ILE103
|
4.7
|
42.1
|
1.0
|
HB2
|
A:ASP107
|
4.7
|
23.5
|
1.0
|
CA
|
A:ILE103
|
4.7
|
42.1
|
1.0
|
HD21
|
A:ASN111
|
4.7
|
72.3
|
1.0
|
HB2
|
A:ASP98
|
4.8
|
42.4
|
1.0
|
CG1
|
A:ILE103
|
4.9
|
40.3
|
1.0
|
CD1
|
A:ILE103
|
4.9
|
21.5
|
1.0
|
HG2
|
A:LYS99
|
5.0
|
4.2
|
1.0
|
|
Reference:
D.Verma,
A.Murmu,
A.Bhattacharya,
K.V.Chary.
An Unusual Nuclear Localized CA2+-Binding Protein From Entamoeba Histolytica That Exhibits Gtpase Activity To Be Published.
Page generated: Sun Jul 14 16:52:36 2024
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