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Calcium in PDB 5dcg: Crystal Structure of Wt Apo Human Glutathione Transferase Pi

Enzymatic activity of Crystal Structure of Wt Apo Human Glutathione Transferase Pi

All present enzymatic activity of Crystal Structure of Wt Apo Human Glutathione Transferase Pi:
2.5.1.18;

Protein crystallography data

The structure of Crystal Structure of Wt Apo Human Glutathione Transferase Pi, PDB code: 5dcg was solved by L.J.Parker, M.W.Parker, C.J.Morton, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.33 / 2.01
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 77.499, 90.250, 68.920, 90.00, 98.49, 90.00
R / Rfree (%) 14.8 / 19

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Wt Apo Human Glutathione Transferase Pi (pdb code 5dcg). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Wt Apo Human Glutathione Transferase Pi, PDB code: 5dcg:

Calcium binding site 1 out of 1 in 5dcg

Go back to Calcium Binding Sites List in 5dcg
Calcium binding site 1 out of 1 in the Crystal Structure of Wt Apo Human Glutathione Transferase Pi


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Wt Apo Human Glutathione Transferase Pi within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca301

b:33.2
occ:1.00
O B:HOH426 2.4 16.7 1.0
O B:GLY77 2.5 9.9 1.0
O B:HOH571 2.5 28.2 1.0
OE1 B:GLN147 2.5 30.6 1.0
O B:HOH464 2.6 17.4 1.0
O B:HOH561 2.8 19.4 1.0
HD23 B:LEU78 3.4 9.9 1.0
HB3 B:GLN147 3.6 21.4 1.0
C B:GLY77 3.7 11.1 1.0
CD B:GLN147 3.7 35.7 1.0
HA3 B:GLY77 4.0 13.2 1.0
HA B:LEU78 4.0 7.3 1.0
CB B:GLN147 4.3 17.9 1.0
HB2 B:GLN147 4.3 21.4 1.0
CD2 B:LEU78 4.3 8.2 1.0
CA B:GLY77 4.5 11.0 1.0
HE22 B:GLN147 4.5 40.1 1.0
O B:HOH577 4.6 25.9 1.0
HD22 B:LEU78 4.6 9.9 1.0
O B:HOH512 4.6 27.9 1.0
NE2 B:GLN147 4.6 33.4 1.0
O B:HOH572 4.6 28.6 1.0
HD21 B:LEU78 4.6 9.9 1.0
CG B:GLN147 4.6 25.2 1.0
N B:LEU78 4.6 7.4 1.0
O B:ILE148 4.7 8.2 1.0
O B:LEU76 4.8 12.9 1.0
CA B:LEU78 4.8 6.1 1.0
O B:HOH488 4.8 10.3 1.0
O B:HOH510 4.9 11.3 1.0
HA2 B:GLY77 5.0 13.2 1.0

Reference:

L.J.Parker, M.W.Parker, C.J.Morton, A.Bocedi, D.B.Ascher, J.B.Aitken, H.H.Harris, M.Lo Bello, G.Ricci. Visualisation of Organoarsenic Human Glutathione Transferase P1-1 Complexes: Metabolism of Arsenic-Based Therapeutics To Be Published.
Page generated: Sun Jul 14 17:59:32 2024

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