Calcium in PDB 5dej: Transthyretin Natural Mutant A19D

The structure of Transthyretin Natural Mutant A19D, PDB code: 5dej was solved by H.M.Pereira, P.Ferreira, C.Andrade, C.Lima, F.Palhano, D.Foguel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	37.55 / 1.37
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	85.930, 41.750, 62.740, 90.00, 90.00, 90.00
R / Rfree (%)	17.9 / 20.7

The binding sites of Calcium atom in the Transthyretin Natural Mutant A19D (pdb code 5dej). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Transthyretin Natural Mutant A19D, PDB code: 5dej:

Calcium binding site 1 out of 1 in the Transthyretin Natural Mutant A19D


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Transthyretin Natural Mutant A19D within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca201 b:14.2 occ:0.00 O A:ASP99 2.3 24.1 1.0 O A:HOH347 2.4 39.1 1.0 OD1 A:ASP99 2.7 34.4 1.0 OE1 A:GLU66 2.8 24.5 1.0 C A:ASP99 3.4 22.5 1.0 CG A:ASP99 3.7 33.7 1.0 CD A:GLU66 3.7 19.6 1.0 O A:HOH344 3.8 33.3 1.0 OE2 A:GLU66 3.8 19.6 1.0 O A:HOH379 3.9 36.4 1.0 CA A:ASP99 4.0 21.6 1.0 CB A:ASP99 4.5 27.1 1.0 OD2 A:ASP99 4.5 37.9 1.0 N A:SER100 4.6 21.9 1.0 O A:HOH359 4.9 35.8 1.0 CA A:SER100 5.0 24.3 1.0

P.Ferreira, H.M.Pereira, C.Andrade, C.Lima, F.Palhano, D.Foguel. Crystal Structure of Human Transthyretin Natural Mutant A19D To Be Published.