Calcium in PDB 5e8q: Crystal Structure of Dhfr in 20% Isopropanol

Enzymatic activity of Crystal Structure of Dhfr in 20% Isopropanol

All present enzymatic activity of Crystal Structure of Dhfr in 20% Isopropanol:
1.5.1.3;

Protein crystallography data

The structure of Crystal Structure of Dhfr in 20% Isopropanol, PDB code: 5e8q was solved by M.J.Cuneo, P.K.Agarwal, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.30 / 1.80
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 91.946, 91.946, 73.088, 90.00, 90.00, 120.00
R / Rfree (%) 19.7 / 25.3

Other elements in 5e8q:

The structure of Crystal Structure of Dhfr in 20% Isopropanol also contains other interesting chemical elements:

Chlorine (Cl) 4 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Dhfr in 20% Isopropanol (pdb code 5e8q). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Dhfr in 20% Isopropanol, PDB code: 5e8q:

Calcium binding site 1 out of 1 in 5e8q

Go back to Calcium Binding Sites List in 5e8q
Calcium binding site 1 out of 1 in the Crystal Structure of Dhfr in 20% Isopropanol


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Dhfr in 20% Isopropanol within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca203

b:18.4
occ:1.00
O B:SER135 2.3 18.3 1.0
O B:HOH439 2.5 37.6 1.0
O B:HOH314 3.3 29.0 1.0
C B:SER135 3.5 19.2 1.0
CA B:VAL136 4.3 12.6 1.0
CB B:SER135 4.3 13.5 1.0
N B:VAL136 4.3 13.6 1.0
CA B:SER135 4.4 16.0 1.0
N B:SER135 4.6 17.9 1.0
OG B:SER135 4.6 17.6 1.0
CG B:GLU134 4.8 17.7 1.0
OE2 B:GLU134 4.9 21.2 1.0
CL B:CL205 4.9 28.1 1.0
C B:VAL136 4.9 16.9 1.0

Reference:

J.M.Borrguero, M.J.Cuneo, P.K.Agarwal. Solvent Conditions Control Enzyme Dynamics and Catalysis To Be Published.
Page generated: Sat Dec 12 05:23:10 2020

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